Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA5Q9Y5H7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA5Q9Y5H7 AL117328.2-201ENST00000624617 1940 ntBASIC25.32■■□□□ 1.64
PCDHA5Q9Y5H7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PCDHA5Q9Y5H7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA5Q9Y5H7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
PCDHA5Q9Y5H7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA5Q9Y5H7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA5Q9Y5H7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDHA5Q9Y5H7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHA5Q9Y5H7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHA5Q9Y5H7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
PCDHA5Q9Y5H7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHA5Q9Y5H7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA5Q9Y5H7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA5Q9Y5H7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA5Q9Y5H7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA5Q9Y5H7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA5Q9Y5H7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHA5Q9Y5H7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHA5Q9Y5H7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 AC004448.1-201ENST00000458332 883 ntBASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA5Q9Y5H7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA5Q9Y5H7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA5Q9Y5H7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHA5Q9Y5H7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA5Q9Y5H7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDHA5Q9Y5H7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
PCDHA5Q9Y5H7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHA5Q9Y5H7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
PCDHA5Q9Y5H7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA5Q9Y5H7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDHA5Q9Y5H7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDHA5Q9Y5H7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA5Q9Y5H7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA5Q9Y5H7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA5Q9Y5H7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
PCDHA5Q9Y5H7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.26■■□□□ 1.63
PCDHA5Q9Y5H7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA5Q9Y5H7 MIR4508-201ENST00000584178 70 ntBASIC25.26■■□□□ 1.63
PCDHA5Q9Y5H7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA5Q9Y5H7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
PCDHA5Q9Y5H7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDHA5Q9Y5H7 AC079630.1-202ENST00000618127 1840 ntBASIC25.26■■□□□ 1.63
PCDHA5Q9Y5H7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA5Q9Y5H7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA5Q9Y5H7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA5Q9Y5H7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
PCDHA5Q9Y5H7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA5Q9Y5H7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA5Q9Y5H7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.24■■□□□ 1.63
PCDHA5Q9Y5H7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.24■■□□□ 1.63
PCDHA5Q9Y5H7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA5Q9Y5H7 AC103834.1-201ENST00000520383 144 ntBASIC25.24■■□□□ 1.63
PCDHA5Q9Y5H7 EP400NL-214ENST00000641289 2402 ntBASIC25.24■■□□□ 1.63
PCDHA5Q9Y5H7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA5Q9Y5H7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA5Q9Y5H7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
PCDHA5Q9Y5H7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA5Q9Y5H7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA5Q9Y5H7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA5Q9Y5H7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA5Q9Y5H7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA5Q9Y5H7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
PCDHA5Q9Y5H7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA5Q9Y5H7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA5Q9Y5H7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms