Protein–RNA interactions for Protein: Q9Y5G8

PCDHGA5, Protocadherin gamma-A5, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA5Q9Y5G8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
PCDHGA5Q9Y5G8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGA5Q9Y5G8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA5Q9Y5G8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA5Q9Y5G8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA5Q9Y5G8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA5Q9Y5G8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA5Q9Y5G8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA5Q9Y5G8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHGA5Q9Y5G8 TERF1P2-201ENST00000583350 1212 ntBASIC22.41■■□□□ 1.18
PCDHGA5Q9Y5G8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGA5Q9Y5G8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PCDHGA5Q9Y5G8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGA5Q9Y5G8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.4■■□□□ 1.18
PCDHGA5Q9Y5G8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.4■■□□□ 1.18
PCDHGA5Q9Y5G8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA5Q9Y5G8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PCDHGA5Q9Y5G8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PCDHGA5Q9Y5G8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGA5Q9Y5G8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDHGA5Q9Y5G8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGA5Q9Y5G8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDHGA5Q9Y5G8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.39■■□□□ 1.17
PCDHGA5Q9Y5G8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.39■■□□□ 1.17
PCDHGA5Q9Y5G8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA5Q9Y5G8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA5Q9Y5G8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA5Q9Y5G8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA5Q9Y5G8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA5Q9Y5G8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA5Q9Y5G8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA5Q9Y5G8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA5Q9Y5G8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGA5Q9Y5G8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGA5Q9Y5G8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA5Q9Y5G8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA5Q9Y5G8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA5Q9Y5G8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA5Q9Y5G8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGA5Q9Y5G8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGA5Q9Y5G8 AC141586.4-201ENST00000624558 1573 ntBASIC22.38■■□□□ 1.17
PCDHGA5Q9Y5G8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA5Q9Y5G8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHGA5Q9Y5G8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PCDHGA5Q9Y5G8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA5Q9Y5G8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PCDHGA5Q9Y5G8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHGA5Q9Y5G8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHGA5Q9Y5G8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 MIR6089-201ENST00000616698 64 ntBASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA5Q9Y5G8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PCDHGA5Q9Y5G8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA5Q9Y5G8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGA5Q9Y5G8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHGA5Q9Y5G8 AL161729.1-201ENST00000604104 1402 ntBASIC22.34■■□□□ 1.17
PCDHGA5Q9Y5G8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA5Q9Y5G8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHGA5Q9Y5G8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA5Q9Y5G8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGA5Q9Y5G8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHGA5Q9Y5G8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDHGA5Q9Y5G8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA5Q9Y5G8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDHGA5Q9Y5G8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PCDHGA5Q9Y5G8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
PCDHGA5Q9Y5G8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
PCDHGA5Q9Y5G8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGA5Q9Y5G8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PCDHGA5Q9Y5G8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA5Q9Y5G8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA5Q9Y5G8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA5Q9Y5G8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms