Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGA6Q9Y5G7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
PCDHGA6Q9Y5G7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA6Q9Y5G7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA6Q9Y5G7 AC135279.3-201ENST00000610945 1311 ntBASIC21.69■■□□□ 1.06
PCDHGA6Q9Y5G7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA6Q9Y5G7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA6Q9Y5G7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA6Q9Y5G7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHGA6Q9Y5G7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA6Q9Y5G7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 AC142381.2-201ENST00000566120 298 ntBASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 AL031432.3-201ENST00000607698 485 ntBASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGA6Q9Y5G7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHGA6Q9Y5G7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHGA6Q9Y5G7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA6Q9Y5G7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA6Q9Y5G7 EDA-201ENST00000338901 1233 ntBASIC21.67■■□□□ 1.06
PCDHGA6Q9Y5G7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PCDHGA6Q9Y5G7 SUDS3P1-201ENST00000505831 966 ntBASIC21.67■■□□□ 1.06
PCDHGA6Q9Y5G7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGA6Q9Y5G7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHGA6Q9Y5G7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA6Q9Y5G7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA6Q9Y5G7 AC141586.4-201ENST00000624558 1573 ntBASIC21.66■■□□□ 1.06
PCDHGA6Q9Y5G7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDHGA6Q9Y5G7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDHGA6Q9Y5G7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA6Q9Y5G7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGA6Q9Y5G7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA6Q9Y5G7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA6Q9Y5G7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA6Q9Y5G7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGA6Q9Y5G7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHGA6Q9Y5G7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PCDHGA6Q9Y5G7 DUX4L19-201ENST00000557448 1267 ntBASIC21.65■■□□□ 1.06
PCDHGA6Q9Y5G7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA6Q9Y5G7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PCDHGA6Q9Y5G7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA6Q9Y5G7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA6Q9Y5G7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.64■■□□□ 1.06
PCDHGA6Q9Y5G7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGA6Q9Y5G7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA6Q9Y5G7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 AC024257.2-201ENST00000549699 147 ntBASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 AL355001.2-201ENST00000620617 1191 ntBASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGA6Q9Y5G7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA6Q9Y5G7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA6Q9Y5G7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PCDHGA6Q9Y5G7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA6Q9Y5G7 ZNRF2P3-201ENST00000424200 374 ntBASIC21.62■■□□□ 1.05
PCDHGA6Q9Y5G7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGA6Q9Y5G7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PCDHGA6Q9Y5G7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGA6Q9Y5G7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PCDHGA6Q9Y5G7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
PCDHGA6Q9Y5G7 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGA6Q9Y5G7 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGA6Q9Y5G7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHGA6Q9Y5G7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA6Q9Y5G7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PCDHGA6Q9Y5G7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHGA6Q9Y5G7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.61■■□□□ 1.05
PCDHGA6Q9Y5G7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms