Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHB1Q9Y5F3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PCDHB1Q9Y5F3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB1Q9Y5F3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB1Q9Y5F3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB1Q9Y5F3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB1Q9Y5F3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHB1Q9Y5F3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB1Q9Y5F3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
PCDHB1Q9Y5F3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
PCDHB1Q9Y5F3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB1Q9Y5F3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 PBX2P1-201ENST00000493219 1291 ntBASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 SNX5-217ENST00000606557 1087 ntBASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB1Q9Y5F3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB1Q9Y5F3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB1Q9Y5F3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB1Q9Y5F3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB1Q9Y5F3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB1Q9Y5F3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHB1Q9Y5F3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHB1Q9Y5F3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB1Q9Y5F3 AC106739.1-201ENST00000617035 715 ntBASIC22.54■■□□□ 1.2
PCDHB1Q9Y5F3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.54■■□□□ 1.2
PCDHB1Q9Y5F3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB1Q9Y5F3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHB1Q9Y5F3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB1Q9Y5F3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB1Q9Y5F3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PCDHB1Q9Y5F3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PCDHB1Q9Y5F3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB1Q9Y5F3 RARRES2P6-201ENST00000567333 442 ntBASIC22.53■■□□□ 1.2
PCDHB1Q9Y5F3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB1Q9Y5F3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB1Q9Y5F3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHB1Q9Y5F3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PCDHB1Q9Y5F3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB1Q9Y5F3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB1Q9Y5F3 AC142381.2-201ENST00000566120 298 ntBASIC22.52■■□□□ 1.2
PCDHB1Q9Y5F3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHB1Q9Y5F3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.52■■□□□ 1.2
PCDHB1Q9Y5F3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB1Q9Y5F3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB1Q9Y5F3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PCDHB1Q9Y5F3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB1Q9Y5F3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.52■■□□□ 1.19
PCDHB1Q9Y5F3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
PCDHB1Q9Y5F3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB1Q9Y5F3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB1Q9Y5F3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHB1Q9Y5F3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
PCDHB1Q9Y5F3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.51■■□□□ 1.19
PCDHB1Q9Y5F3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCDHB1Q9Y5F3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB1Q9Y5F3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB1Q9Y5F3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB1Q9Y5F3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB1Q9Y5F3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB1Q9Y5F3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB1Q9Y5F3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB1Q9Y5F3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB1Q9Y5F3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB1Q9Y5F3 AC092666.2-201ENST00000613287 246 ntBASIC22.5■■□□□ 1.19
PCDHB1Q9Y5F3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB1Q9Y5F3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHB1Q9Y5F3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB1Q9Y5F3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHB1Q9Y5F3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB1Q9Y5F3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.49■■□□□ 1.19
PCDHB1Q9Y5F3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHB1Q9Y5F3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHB1Q9Y5F3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHB1Q9Y5F3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB1Q9Y5F3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PCDHB1Q9Y5F3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB1Q9Y5F3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms