Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHA7Q9UN72 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHA7Q9UN72 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHA7Q9UN72 AC004448.1-201ENST00000458332 883 ntBASIC25.74■■□□□ 1.71
PCDHA7Q9UN72 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHA7Q9UN72 AC103834.1-201ENST00000520383 144 ntBASIC25.74■■□□□ 1.71
PCDHA7Q9UN72 AL033527.3-201ENST00000566366 1196 ntBASIC25.74■■□□□ 1.71
PCDHA7Q9UN72 MIR4508-201ENST00000584178 70 ntBASIC25.74■■□□□ 1.71
PCDHA7Q9UN72 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.74■■□□□ 1.71
PCDHA7Q9UN72 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHA7Q9UN72 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.73■■□□□ 1.71
PCDHA7Q9UN72 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHA7Q9UN72 AC012354.3-201ENST00000623734 483 ntBASIC25.73■■□□□ 1.71
PCDHA7Q9UN72 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHA7Q9UN72 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHA7Q9UN72 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
PCDHA7Q9UN72 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.72■■□□□ 1.71
PCDHA7Q9UN72 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHA7Q9UN72 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
PCDHA7Q9UN72 AL117328.2-201ENST00000624617 1940 ntBASIC25.72■■□□□ 1.71
PCDHA7Q9UN72 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
PCDHA7Q9UN72 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHA7Q9UN72 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDHA7Q9UN72 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHA7Q9UN72 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA7Q9UN72 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDHA7Q9UN72 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA7Q9UN72 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.71■■□□□ 1.71
PCDHA7Q9UN72 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.71■■□□□ 1.71
PCDHA7Q9UN72 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA7Q9UN72 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
PCDHA7Q9UN72 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA7Q9UN72 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHA7Q9UN72 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDHA7Q9UN72 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA7Q9UN72 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.7■■□□□ 1.7
PCDHA7Q9UN72 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHA7Q9UN72 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
PCDHA7Q9UN72 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.7■■□□□ 1.7
PCDHA7Q9UN72 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.7■■□□□ 1.7
PCDHA7Q9UN72 AC079630.1-202ENST00000618127 1840 ntBASIC25.7■■□□□ 1.7
PCDHA7Q9UN72 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA7Q9UN72 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA7Q9UN72 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHA7Q9UN72 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA7Q9UN72 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA7Q9UN72 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA7Q9UN72 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA7Q9UN72 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHA7Q9UN72 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.68■■□□□ 1.7
PCDHA7Q9UN72 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.68■■□□□ 1.7
PCDHA7Q9UN72 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA7Q9UN72 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA7Q9UN72 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
PCDHA7Q9UN72 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA7Q9UN72 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA7Q9UN72 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA7Q9UN72 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA7Q9UN72 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
PCDHA7Q9UN72 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
PCDHA7Q9UN72 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA7Q9UN72 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA7Q9UN72 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA7Q9UN72 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA7Q9UN72 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA7Q9UN72 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
PCDHA7Q9UN72 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA7Q9UN72 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA7Q9UN72 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA7Q9UN72 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA7Q9UN72 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PCDHA7Q9UN72 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA7Q9UN72 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHA7Q9UN72 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA7Q9UN72 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHA7Q9UN72 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHA7Q9UN72 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHA7Q9UN72 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PCDHA7Q9UN72 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA7Q9UN72 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA7Q9UN72 AC103724.3-201ENST00000564481 992 ntBASIC25.64■■□□□ 1.7
PCDHA7Q9UN72 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHA7Q9UN72 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
PCDHA7Q9UN72 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 EP400NL-214ENST00000641289 2402 ntBASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 KRT8P33-201ENST00000508125 1423 ntBASIC25.63■■□□□ 1.69
PCDHA7Q9UN72 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHA7Q9UN72 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHA7Q9UN72 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PCDHA7Q9UN72 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA7Q9UN72 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms