Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF346Q9UL40 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF346Q9UL40 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF346Q9UL40 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF346Q9UL40 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF346Q9UL40 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF346Q9UL40 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ZNF346Q9UL40 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF346Q9UL40 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.27■□□□□ 0.84
ZNF346Q9UL40 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF346Q9UL40 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF346Q9UL40 AL031848.2-201ENST00000607670 837 ntBASIC20.27■□□□□ 0.84
ZNF346Q9UL40 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF346Q9UL40 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZNF346Q9UL40 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZNF346Q9UL40 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 AC137630.3-201ENST00000607245 391 ntBASIC20.26■□□□□ 0.83
ZNF346Q9UL40 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 DUSP8P3-201ENST00000399571 1760 ntBASIC20.26■□□□□ 0.83
ZNF346Q9UL40 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF346Q9UL40 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF346Q9UL40 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF346Q9UL40 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF346Q9UL40 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ZNF346Q9UL40 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF346Q9UL40 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF346Q9UL40 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF346Q9UL40 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
ZNF346Q9UL40 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF346Q9UL40 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF346Q9UL40 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF346Q9UL40 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF346Q9UL40 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 SNX5-217ENST00000606557 1087 ntBASIC20.22■□□□□ 0.83
ZNF346Q9UL40 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF346Q9UL40 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF346Q9UL40 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF346Q9UL40 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
ZNF346Q9UL40 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF346Q9UL40 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF346Q9UL40 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ZNF346Q9UL40 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF346Q9UL40 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.21■□□□□ 0.83
ZNF346Q9UL40 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF346Q9UL40 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZNF346Q9UL40 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF346Q9UL40 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF346Q9UL40 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF346Q9UL40 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms