Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
THUMPD1Q9NXG2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
THUMPD1Q9NXG2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
THUMPD1Q9NXG2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
THUMPD1Q9NXG2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.19■□□□□ 0.98
THUMPD1Q9NXG2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.19■□□□□ 0.98
THUMPD1Q9NXG2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.19■□□□□ 0.98
THUMPD1Q9NXG2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
THUMPD1Q9NXG2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
THUMPD1Q9NXG2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
THUMPD1Q9NXG2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD1Q9NXG2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD1Q9NXG2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.18■□□□□ 0.98
THUMPD1Q9NXG2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD1Q9NXG2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD1Q9NXG2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD1Q9NXG2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
THUMPD1Q9NXG2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.18■□□□□ 0.98
THUMPD1Q9NXG2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 MIR4281-201ENST00000580852 62 ntBASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
THUMPD1Q9NXG2 EP400NL-214ENST00000641289 2402 ntBASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 AF131216.4-201ENST00000638924 1588 ntBASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
THUMPD1Q9NXG2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.15■□□□□ 0.98
THUMPD1Q9NXG2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
THUMPD1Q9NXG2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
THUMPD1Q9NXG2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
THUMPD1Q9NXG2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
THUMPD1Q9NXG2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.14■□□□□ 0.98
THUMPD1Q9NXG2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD1Q9NXG2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD1Q9NXG2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
THUMPD1Q9NXG2 AC004448.1-201ENST00000458332 883 ntBASIC21.14■□□□□ 0.97
THUMPD1Q9NXG2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.14■□□□□ 0.97
THUMPD1Q9NXG2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.14■□□□□ 0.97
THUMPD1Q9NXG2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD1Q9NXG2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD1Q9NXG2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD1Q9NXG2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD1Q9NXG2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
THUMPD1Q9NXG2 C1orf229-201ENST00000623686 2258 ntBASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 MIR4508-201ENST00000584178 70 ntBASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 PVT1_1.1-201ENST00000615125 194 ntBASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
THUMPD1Q9NXG2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD1Q9NXG2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD1Q9NXG2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD1Q9NXG2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD1Q9NXG2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.12■□□□□ 0.97
THUMPD1Q9NXG2 AC010980.1-201ENST00000587192 1142 ntBASIC21.12■□□□□ 0.97
THUMPD1Q9NXG2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
THUMPD1Q9NXG2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD1Q9NXG2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THUMPD1Q9NXG2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms