Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.92■□□□□ 0.94
POLE3Q9NRF9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
POLE3Q9NRF9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.9■□□□□ 0.94
POLE3Q9NRF9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLE3Q9NRF9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLE3Q9NRF9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLE3Q9NRF9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.9■□□□□ 0.94
POLE3Q9NRF9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.9■□□□□ 0.94
POLE3Q9NRF9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.9■□□□□ 0.94
POLE3Q9NRF9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLE3Q9NRF9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
POLE3Q9NRF9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.9■□□□□ 0.94
POLE3Q9NRF9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLE3Q9NRF9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.89■□□□□ 0.94
POLE3Q9NRF9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
POLE3Q9NRF9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLE3Q9NRF9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
POLE3Q9NRF9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.89■□□□□ 0.93
POLE3Q9NRF9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.89■□□□□ 0.93
POLE3Q9NRF9 DUSP8P3-201ENST00000399571 1760 ntBASIC20.89■□□□□ 0.93
POLE3Q9NRF9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLE3Q9NRF9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
POLE3Q9NRF9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
POLE3Q9NRF9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLE3Q9NRF9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 KRT125P-201ENST00000546827 989 ntBASIC20.88■□□□□ 0.93
POLE3Q9NRF9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
POLE3Q9NRF9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.87■□□□□ 0.93
POLE3Q9NRF9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLE3Q9NRF9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.87■□□□□ 0.93
POLE3Q9NRF9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
POLE3Q9NRF9 RARRES2P1-201ENST00000474487 481 ntBASIC20.87■□□□□ 0.93
POLE3Q9NRF9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLE3Q9NRF9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLE3Q9NRF9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLE3Q9NRF9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLE3Q9NRF9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.87■□□□□ 0.93
POLE3Q9NRF9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLE3Q9NRF9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 AC012676.1-201ENST00000574705 1949 ntBASIC20.86■□□□□ 0.93
POLE3Q9NRF9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
POLE3Q9NRF9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
POLE3Q9NRF9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.84■□□□□ 0.93
POLE3Q9NRF9 AC005703.6-201ENST00000623265 1329 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms