Protein–RNA interactions for Protein: Q9NPI8

FANCF, Fanconi anemia group F protein, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FANCFQ9NPI8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.44■□□□□ 0.86
FANCFQ9NPI8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FANCFQ9NPI8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FANCFQ9NPI8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FANCFQ9NPI8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.44■□□□□ 0.86
FANCFQ9NPI8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
FANCFQ9NPI8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 MIR6722-201ENST00000617286 78 ntBASIC20.43■□□□□ 0.86
FANCFQ9NPI8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FANCFQ9NPI8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FANCFQ9NPI8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FANCFQ9NPI8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.42■□□□□ 0.86
FANCFQ9NPI8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.42■□□□□ 0.86
FANCFQ9NPI8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FANCFQ9NPI8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
FANCFQ9NPI8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
FANCFQ9NPI8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FANCFQ9NPI8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FANCFQ9NPI8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.41■□□□□ 0.86
FANCFQ9NPI8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FANCFQ9NPI8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FANCFQ9NPI8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.41■□□□□ 0.86
FANCFQ9NPI8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.41■□□□□ 0.86
FANCFQ9NPI8 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.41■□□□□ 0.86
FANCFQ9NPI8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FANCFQ9NPI8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.4■□□□□ 0.86
FANCFQ9NPI8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
FANCFQ9NPI8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
FANCFQ9NPI8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.39■□□□□ 0.86
FANCFQ9NPI8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
FANCFQ9NPI8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FANCFQ9NPI8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FANCFQ9NPI8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.39■□□□□ 0.86
FANCFQ9NPI8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FANCFQ9NPI8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 SNX5-217ENST00000606557 1087 ntBASIC20.39■□□□□ 0.85
FANCFQ9NPI8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
FANCFQ9NPI8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FANCFQ9NPI8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
FANCFQ9NPI8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
FANCFQ9NPI8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.38■□□□□ 0.85
FANCFQ9NPI8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.38■□□□□ 0.85
FANCFQ9NPI8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.38■□□□□ 0.85
FANCFQ9NPI8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FANCFQ9NPI8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FANCFQ9NPI8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
FANCFQ9NPI8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FANCFQ9NPI8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.37■□□□□ 0.85
FANCFQ9NPI8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
FANCFQ9NPI8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.37■□□□□ 0.85
FANCFQ9NPI8 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.37■□□□□ 0.85
FANCFQ9NPI8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FANCFQ9NPI8 MIR3621-201ENST00000580529 85 ntBASIC20.37■□□□□ 0.85
FANCFQ9NPI8 AL117332.1-201ENST00000622628 974 ntBASIC20.37■□□□□ 0.85
FANCFQ9NPI8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.37■□□□□ 0.85
FANCFQ9NPI8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
FANCFQ9NPI8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FANCFQ9NPI8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.37■□□□□ 0.85
FANCFQ9NPI8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FANCFQ9NPI8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms