Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRCC1Q9NPI7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRCC1Q9NPI7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRCC1Q9NPI7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.67■□□□□ 0.9
KRCC1Q9NPI7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRCC1Q9NPI7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.67■□□□□ 0.9
KRCC1Q9NPI7 AL117328.2-201ENST00000624617 1940 ntBASIC20.66■□□□□ 0.9
KRCC1Q9NPI7 KRT18P60-201ENST00000312876 1297 ntBASIC20.66■□□□□ 0.9
KRCC1Q9NPI7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRCC1Q9NPI7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRCC1Q9NPI7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRCC1Q9NPI7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRCC1Q9NPI7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRCC1Q9NPI7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRCC1Q9NPI7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRCC1Q9NPI7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRCC1Q9NPI7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRCC1Q9NPI7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.65■□□□□ 0.9
KRCC1Q9NPI7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRCC1Q9NPI7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KRCC1Q9NPI7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.89
KRCC1Q9NPI7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRCC1Q9NPI7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRCC1Q9NPI7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRCC1Q9NPI7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
KRCC1Q9NPI7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRCC1Q9NPI7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRCC1Q9NPI7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRCC1Q9NPI7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 AC233723.2-201ENST00000623798 2106 ntBASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRCC1Q9NPI7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRCC1Q9NPI7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.62■□□□□ 0.89
KRCC1Q9NPI7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRCC1Q9NPI7 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.62■□□□□ 0.89
KRCC1Q9NPI7 BHLHE23-202ENST00000612929 1109 ntBASIC20.62■□□□□ 0.89
KRCC1Q9NPI7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRCC1Q9NPI7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRCC1Q9NPI7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 ABHD17AP5-201ENST00000580133 923 ntBASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRCC1Q9NPI7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 AC074183.2-201ENST00000623112 922 ntBASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRCC1Q9NPI7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
KRCC1Q9NPI7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRCC1Q9NPI7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms