Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH18Q9HCL0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH18Q9HCL0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
PCDH18Q9HCL0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
PCDH18Q9HCL0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.44■■□□□ 1.34
PCDH18Q9HCL0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH18Q9HCL0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH18Q9HCL0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDH18Q9HCL0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH18Q9HCL0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH18Q9HCL0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH18Q9HCL0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDH18Q9HCL0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
PCDH18Q9HCL0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDH18Q9HCL0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.43■■□□□ 1.34
PCDH18Q9HCL0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDH18Q9HCL0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.42■■□□□ 1.34
PCDH18Q9HCL0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH18Q9HCL0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH18Q9HCL0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH18Q9HCL0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
PCDH18Q9HCL0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH18Q9HCL0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH18Q9HCL0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDH18Q9HCL0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH18Q9HCL0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH18Q9HCL0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH18Q9HCL0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDH18Q9HCL0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
PCDH18Q9HCL0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDH18Q9HCL0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH18Q9HCL0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH18Q9HCL0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDH18Q9HCL0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH18Q9HCL0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDH18Q9HCL0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
PCDH18Q9HCL0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH18Q9HCL0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH18Q9HCL0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH18Q9HCL0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH18Q9HCL0 DUSP8P3-201ENST00000399571 1760 ntBASIC23.4■■□□□ 1.34
PCDH18Q9HCL0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH18Q9HCL0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDH18Q9HCL0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PCDH18Q9HCL0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDH18Q9HCL0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDH18Q9HCL0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.39■■□□□ 1.34
PCDH18Q9HCL0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDH18Q9HCL0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
PCDH18Q9HCL0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH18Q9HCL0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH18Q9HCL0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH18Q9HCL0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH18Q9HCL0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 AC005703.6-201ENST00000623265 1329 ntBASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 AC079630.1-202ENST00000618127 1840 ntBASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 C9orf163-202ENST00000624034 2573 ntBASIC23.38■■□□□ 1.33
PCDH18Q9HCL0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH18Q9HCL0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH18Q9HCL0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH18Q9HCL0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.37■■□□□ 1.33
PCDH18Q9HCL0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH18Q9HCL0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH18Q9HCL0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDH18Q9HCL0 AC068473.5-201ENST00000616428 2072 ntBASIC23.37■■□□□ 1.33
PCDH18Q9HCL0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH18Q9HCL0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH18Q9HCL0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
PCDH18Q9HCL0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
PCDH18Q9HCL0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDH18Q9HCL0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.36■■□□□ 1.33
PCDH18Q9HCL0 MTDHP2-201ENST00000601468 714 ntBASIC23.36■■□□□ 1.33
PCDH18Q9HCL0 AL035685.1-201ENST00000636663 812 ntBASIC23.36■■□□□ 1.33
PCDH18Q9HCL0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PCDH18Q9HCL0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
PCDH18Q9HCL0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH18Q9HCL0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH18Q9HCL0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH18Q9HCL0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
PCDH18Q9HCL0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDH18Q9HCL0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH18Q9HCL0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH18Q9HCL0 TSPY9P-201ENST00000440215 945 ntBASIC23.35■■□□□ 1.33
PCDH18Q9HCL0 TSPY11P-201ENST00000442607 1045 ntBASIC23.35■■□□□ 1.33
PCDH18Q9HCL0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH18Q9HCL0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PCDH18Q9HCL0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH18Q9HCL0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.34■■□□□ 1.33
PCDH18Q9HCL0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH18Q9HCL0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
PCDH18Q9HCL0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms