Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.29■■■□□ 2.12
TNRC6CQ9HCJ0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TNRC6CQ9HCJ0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.29■■■□□ 2.12
TNRC6CQ9HCJ0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TNRC6CQ9HCJ0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.28■■■□□ 2.12
TNRC6CQ9HCJ0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
TNRC6CQ9HCJ0 YBX1P1-201ENST00000445822 960 ntBASIC28.28■■■□□ 2.12
TNRC6CQ9HCJ0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.28■■■□□ 2.12
TNRC6CQ9HCJ0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 TSPY26P-201ENST00000476365 1326 ntBASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 HLA-L-211ENST00000482052 1765 ntBASIC28.27■■■□□ 2.12
TNRC6CQ9HCJ0 pRNA.6-201ENST00000610482 90 ntBASIC28.26■■■□□ 2.12
TNRC6CQ9HCJ0 pRNA.5-201ENST00000612139 90 ntBASIC28.26■■■□□ 2.12
TNRC6CQ9HCJ0 pRNA.11-201ENST00000618423 90 ntBASIC28.26■■■□□ 2.12
TNRC6CQ9HCJ0 pRNA.13-201ENST00000619112 90 ntBASIC28.26■■■□□ 2.12
TNRC6CQ9HCJ0 ESRRAP2-201ENST00000418437 1549 ntBASIC28.26■■■□□ 2.11
TNRC6CQ9HCJ0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TNRC6CQ9HCJ0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TNRC6CQ9HCJ0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
TNRC6CQ9HCJ0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TNRC6CQ9HCJ0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TNRC6CQ9HCJ0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 ABHD17AP1-201ENST00000358206 933 ntBASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.25■■■□□ 2.11
TNRC6CQ9HCJ0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TNRC6CQ9HCJ0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.24■■■□□ 2.11
TNRC6CQ9HCJ0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TNRC6CQ9HCJ0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.24■■■□□ 2.11
TNRC6CQ9HCJ0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TNRC6CQ9HCJ0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TNRC6CQ9HCJ0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.23■■■□□ 2.11
TNRC6CQ9HCJ0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.23■■■□□ 2.11
TNRC6CQ9HCJ0 AC012414.1-201ENST00000556676 535 ntBASIC28.23■■■□□ 2.11
TNRC6CQ9HCJ0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
TNRC6CQ9HCJ0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TNRC6CQ9HCJ0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TNRC6CQ9HCJ0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.23■■■□□ 2.11
TNRC6CQ9HCJ0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.23■■■□□ 2.11
TNRC6CQ9HCJ0 AC126544.1-201ENST00000580842 1059 ntBASIC28.23■■■□□ 2.11
TNRC6CQ9HCJ0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TNRC6CQ9HCJ0 AC145676.1-201ENST00000514988 2004 ntBASIC28.22■■■□□ 2.11
TNRC6CQ9HCJ0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.22■■■□□ 2.11
TNRC6CQ9HCJ0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.22■■■□□ 2.11
TNRC6CQ9HCJ0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.22■■■□□ 2.11
TNRC6CQ9HCJ0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TNRC6CQ9HCJ0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TNRC6CQ9HCJ0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
TNRC6CQ9HCJ0 IGHV3-19-201ENST00000521488 291 ntBASIC28.21■■■□□ 2.11
TNRC6CQ9HCJ0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TNRC6CQ9HCJ0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.21■■■□□ 2.11
TNRC6CQ9HCJ0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.2■■■□□ 2.11
TNRC6CQ9HCJ0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TNRC6CQ9HCJ0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.2■■■□□ 2.11
TNRC6CQ9HCJ0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28.2■■■□□ 2.11
TNRC6CQ9HCJ0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
TNRC6CQ9HCJ0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.2■■■□□ 2.11
TNRC6CQ9HCJ0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TNRC6CQ9HCJ0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.2■■■□□ 2.1
TNRC6CQ9HCJ0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
TNRC6CQ9HCJ0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC28.19■■■□□ 2.1
TNRC6CQ9HCJ0 ALDH1A3-203ENST00000557963 1670 ntBASIC28.19■■■□□ 2.1
TNRC6CQ9HCJ0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TNRC6CQ9HCJ0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC28.19■■■□□ 2.1
TNRC6CQ9HCJ0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TNRC6CQ9HCJ0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
TNRC6CQ9HCJ0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TNRC6CQ9HCJ0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.18■■■□□ 2.1
TNRC6CQ9HCJ0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TNRC6CQ9HCJ0 MIR6084-201ENST00000622012 110 ntBASIC28.18■■■□□ 2.1
TNRC6CQ9HCJ0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
TNRC6CQ9HCJ0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TNRC6CQ9HCJ0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
TNRC6CQ9HCJ0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.18■■■□□ 2.1
TNRC6CQ9HCJ0 AL161729.1-201ENST00000604104 1402 ntBASIC28.18■■■□□ 2.1
TNRC6CQ9HCJ0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC28.17■■■□□ 2.1
TNRC6CQ9HCJ0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TNRC6CQ9HCJ0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.17■■■□□ 2.1
TNRC6CQ9HCJ0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
TNRC6CQ9HCJ0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC28.17■■■□□ 2.1
TNRC6CQ9HCJ0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms