Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 AC004448.1-201ENST00000458332 883 ntBASIC21.83■■□□□ 1.09
CLK4Q9HAZ1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLK4Q9HAZ1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.83■■□□□ 1.08
CLK4Q9HAZ1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
CLK4Q9HAZ1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLK4Q9HAZ1 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.82■■□□□ 1.08
CLK4Q9HAZ1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLK4Q9HAZ1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLK4Q9HAZ1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.82■■□□□ 1.08
CLK4Q9HAZ1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLK4Q9HAZ1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLK4Q9HAZ1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CLK4Q9HAZ1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.81■■□□□ 1.08
CLK4Q9HAZ1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CLK4Q9HAZ1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.81■■□□□ 1.08
CLK4Q9HAZ1 MIR6722-201ENST00000617286 78 ntBASIC21.81■■□□□ 1.08
CLK4Q9HAZ1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLK4Q9HAZ1 AC004812.2-201ENST00000611079 2094 ntBASIC21.81■■□□□ 1.08
CLK4Q9HAZ1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLK4Q9HAZ1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CLK4Q9HAZ1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 SNX5-217ENST00000606557 1087 ntBASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLK4Q9HAZ1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 AC131274.2-201ENST00000580697 1507 ntBASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 ABCB10P4-201ENST00000566803 2184 ntBASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
CLK4Q9HAZ1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 LINC00565-201ENST00000562710 2331 ntBASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CLK4Q9HAZ1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLK4Q9HAZ1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.76■■□□□ 1.07
CLK4Q9HAZ1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.76■■□□□ 1.07
CLK4Q9HAZ1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLK4Q9HAZ1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.76■■□□□ 1.07
CLK4Q9HAZ1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLK4Q9HAZ1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.76■■□□□ 1.07
CLK4Q9HAZ1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.76■■□□□ 1.07
CLK4Q9HAZ1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLK4Q9HAZ1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
CLK4Q9HAZ1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CLK4Q9HAZ1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLK4Q9HAZ1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLK4Q9HAZ1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLK4Q9HAZ1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.75■■□□□ 1.07
CLK4Q9HAZ1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLK4Q9HAZ1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLK4Q9HAZ1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
CLK4Q9HAZ1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.75■■□□□ 1.07
CLK4Q9HAZ1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLK4Q9HAZ1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms