Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.46■□□□□ 0.23
MAP1LC3AQ9H492 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
MAP1LC3AQ9H492 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.46■□□□□ 0.23
MAP1LC3AQ9H492 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.46■□□□□ 0.23
MAP1LC3AQ9H492 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MAP1LC3AQ9H492 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MAP1LC3AQ9H492 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MAP1LC3AQ9H492 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 LINC01971-201ENST00000617888 1048 ntBASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
MAP1LC3AQ9H492 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MAP1LC3AQ9H492 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MAP1LC3AQ9H492 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MAP1LC3AQ9H492 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MAP1LC3AQ9H492 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.44■□□□□ 0.22
MAP1LC3AQ9H492 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MAP1LC3AQ9H492 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MAP1LC3AQ9H492 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MAP1LC3AQ9H492 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 HLA-V-202ENST00000446817 847 ntBASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MAP1LC3AQ9H492 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 ESRRAP2-201ENST00000418437 1549 ntBASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
MAP1LC3AQ9H492 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MAP1LC3AQ9H492 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MAP1LC3AQ9H492 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MAP1LC3AQ9H492 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MAP1LC3AQ9H492 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MAP1LC3AQ9H492 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MAP1LC3AQ9H492 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MAP1LC3AQ9H492 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MAP1LC3AQ9H492 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MAP1LC3AQ9H492 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MAP1LC3AQ9H492 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MAP1LC3AQ9H492 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MAP1LC3AQ9H492 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
MAP1LC3AQ9H492 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MAP1LC3AQ9H492 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MAP1LC3AQ9H492 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.4■□□□□ 0.22
MAP1LC3AQ9H492 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MAP1LC3AQ9H492 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MAP1LC3AQ9H492 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MAP1LC3AQ9H492 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.4■□□□□ 0.22
MAP1LC3AQ9H492 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.39■□□□□ 0.21
MAP1LC3AQ9H492 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.39■□□□□ 0.21
MAP1LC3AQ9H492 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.39■□□□□ 0.21
MAP1LC3AQ9H492 AL137060.1-201ENST00000618151 2648 ntBASIC16.39■□□□□ 0.21
MAP1LC3AQ9H492 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MAP1LC3AQ9H492 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MAP1LC3AQ9H492 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.39■□□□□ 0.21
MAP1LC3AQ9H492 MIR3960-201ENST00000583311 91 ntBASIC16.39■□□□□ 0.21
MAP1LC3AQ9H492 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MAP1LC3AQ9H492 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MAP1LC3AQ9H492 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms