Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.46■■□□□ 1.51
NUCKS1Q9H1E3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.46■■□□□ 1.51
NUCKS1Q9H1E3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
NUCKS1Q9H1E3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NUCKS1Q9H1E3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
NUCKS1Q9H1E3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NUCKS1Q9H1E3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
NUCKS1Q9H1E3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
NUCKS1Q9H1E3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.45■■□□□ 1.51
NUCKS1Q9H1E3 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.45■■□□□ 1.51
NUCKS1Q9H1E3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
NUCKS1Q9H1E3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NUCKS1Q9H1E3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NUCKS1Q9H1E3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.45■■□□□ 1.5
NUCKS1Q9H1E3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.45■■□□□ 1.5
NUCKS1Q9H1E3 AL031848.2-201ENST00000607670 837 ntBASIC24.45■■□□□ 1.5
NUCKS1Q9H1E3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NUCKS1Q9H1E3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NUCKS1Q9H1E3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.44■■□□□ 1.5
NUCKS1Q9H1E3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NUCKS1Q9H1E3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NUCKS1Q9H1E3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
NUCKS1Q9H1E3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
NUCKS1Q9H1E3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NUCKS1Q9H1E3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NUCKS1Q9H1E3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NUCKS1Q9H1E3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
NUCKS1Q9H1E3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 AC120024.1-201ENST00000562672 995 ntBASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
NUCKS1Q9H1E3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NUCKS1Q9H1E3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NUCKS1Q9H1E3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
NUCKS1Q9H1E3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NUCKS1Q9H1E3 KRT18P24-201ENST00000344739 1156 ntBASIC24.42■■□□□ 1.5
NUCKS1Q9H1E3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NUCKS1Q9H1E3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NUCKS1Q9H1E3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
NUCKS1Q9H1E3 AC233723.2-201ENST00000623798 2106 ntBASIC24.41■■□□□ 1.5
NUCKS1Q9H1E3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
NUCKS1Q9H1E3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
NUCKS1Q9H1E3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NUCKS1Q9H1E3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NUCKS1Q9H1E3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 AL035685.1-201ENST00000636663 812 ntBASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.4■■□□□ 1.5
NUCKS1Q9H1E3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
NUCKS1Q9H1E3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NUCKS1Q9H1E3 AC009299.2-201ENST00000482477 511 ntBASIC24.39■■□□□ 1.49
NUCKS1Q9H1E3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.39■■□□□ 1.49
NUCKS1Q9H1E3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NUCKS1Q9H1E3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
NUCKS1Q9H1E3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NUCKS1Q9H1E3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
NUCKS1Q9H1E3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NUCKS1Q9H1E3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NUCKS1Q9H1E3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NUCKS1Q9H1E3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NUCKS1Q9H1E3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NUCKS1Q9H1E3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
NUCKS1Q9H1E3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NUCKS1Q9H1E3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.38■■□□□ 1.49
NUCKS1Q9H1E3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.38■■□□□ 1.49
NUCKS1Q9H1E3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.38■■□□□ 1.49
NUCKS1Q9H1E3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NUCKS1Q9H1E3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.37■■□□□ 1.49
NUCKS1Q9H1E3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NUCKS1Q9H1E3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
NUCKS1Q9H1E3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NUCKS1Q9H1E3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.37■■□□□ 1.49
NUCKS1Q9H1E3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.37■■□□□ 1.49
NUCKS1Q9H1E3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.37■■□□□ 1.49
NUCKS1Q9H1E3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NUCKS1Q9H1E3 AF131216.4-201ENST00000638924 1588 ntBASIC24.37■■□□□ 1.49
NUCKS1Q9H1E3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NUCKS1Q9H1E3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NUCKS1Q9H1E3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
NUCKS1Q9H1E3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
NUCKS1Q9H1E3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms