Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLPBQ9H078 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
CLPBQ9H078 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.64■■□□□ 1.22
CLPBQ9H078 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLPBQ9H078 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.64■■□□□ 1.22
CLPBQ9H078 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.64■■□□□ 1.22
CLPBQ9H078 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.64■■□□□ 1.21
CLPBQ9H078 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.64■■□□□ 1.21
CLPBQ9H078 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CLPBQ9H078 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLPBQ9H078 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.64■■□□□ 1.21
CLPBQ9H078 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLPBQ9H078 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLPBQ9H078 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CLPBQ9H078 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLPBQ9H078 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
CLPBQ9H078 ALDH1A3-203ENST00000557963 1670 ntBASIC22.63■■□□□ 1.21
CLPBQ9H078 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CLPBQ9H078 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CLPBQ9H078 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CLPBQ9H078 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLPBQ9H078 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.63■■□□□ 1.21
CLPBQ9H078 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.63■■□□□ 1.21
CLPBQ9H078 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.63■■□□□ 1.21
CLPBQ9H078 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLPBQ9H078 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLPBQ9H078 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLPBQ9H078 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.62■■□□□ 1.21
CLPBQ9H078 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CLPBQ9H078 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLPBQ9H078 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLPBQ9H078 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLPBQ9H078 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CLPBQ9H078 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.62■■□□□ 1.21
CLPBQ9H078 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.62■■□□□ 1.21
CLPBQ9H078 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLPBQ9H078 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.62■■□□□ 1.21
CLPBQ9H078 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.62■■□□□ 1.21
CLPBQ9H078 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CLPBQ9H078 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLPBQ9H078 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CLPBQ9H078 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLPBQ9H078 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CLPBQ9H078 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLPBQ9H078 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CLPBQ9H078 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.61■■□□□ 1.21
CLPBQ9H078 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLPBQ9H078 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLPBQ9H078 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.6■■□□□ 1.21
CLPBQ9H078 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.6■■□□□ 1.21
CLPBQ9H078 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLPBQ9H078 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLPBQ9H078 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.6■■□□□ 1.21
CLPBQ9H078 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLPBQ9H078 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLPBQ9H078 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLPBQ9H078 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLPBQ9H078 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLPBQ9H078 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.59■■□□□ 1.21
CLPBQ9H078 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.59■■□□□ 1.21
CLPBQ9H078 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CLPBQ9H078 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLPBQ9H078 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.58■■□□□ 1.21
CLPBQ9H078 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CLPBQ9H078 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
CLPBQ9H078 MIR935-201ENST00000401179 91 ntBASIC22.58■■□□□ 1.21
CLPBQ9H078 AC005837.3-201ENST00000612163 286 ntBASIC22.58■■□□□ 1.21
CLPBQ9H078 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLPBQ9H078 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.2
CLPBQ9H078 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLPBQ9H078 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLPBQ9H078 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.58■■□□□ 1.2
CLPBQ9H078 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CLPBQ9H078 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLPBQ9H078 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLPBQ9H078 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.57■■□□□ 1.2
CLPBQ9H078 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLPBQ9H078 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLPBQ9H078 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.57■■□□□ 1.2
CLPBQ9H078 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.57■■□□□ 1.2
CLPBQ9H078 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.57■■□□□ 1.2
CLPBQ9H078 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.57■■□□□ 1.2
CLPBQ9H078 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.56■■□□□ 1.2
CLPBQ9H078 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
CLPBQ9H078 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLPBQ9H078 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CLPBQ9H078 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLPBQ9H078 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLPBQ9H078 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.56■■□□□ 1.2
CLPBQ9H078 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.56■■□□□ 1.2
CLPBQ9H078 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CLPBQ9H078 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLPBQ9H078 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLPBQ9H078 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.56■■□□□ 1.2
CLPBQ9H078 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLPBQ9H078 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLPBQ9H078 AC005703.6-201ENST00000623265 1329 ntBASIC22.56■■□□□ 1.2
CLPBQ9H078 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLPBQ9H078 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLPBQ9H078 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms