Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRIM2Q9C040 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM2Q9C040 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM2Q9C040 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM2Q9C040 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRIM2Q9C040 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM2Q9C040 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM2Q9C040 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM2Q9C040 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM2Q9C040 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM2Q9C040 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM2Q9C040 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM2Q9C040 AC137630.3-201ENST00000607245 391 ntBASIC20.7■□□□□ 0.9
TRIM2Q9C040 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM2Q9C040 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRIM2Q9C040 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM2Q9C040 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM2Q9C040 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM2Q9C040 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM2Q9C040 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM2Q9C040 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM2Q9C040 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM2Q9C040 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRIM2Q9C040 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM2Q9C040 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM2Q9C040 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM2Q9C040 DUSP8P3-201ENST00000399571 1760 ntBASIC20.69■□□□□ 0.9
TRIM2Q9C040 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM2Q9C040 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM2Q9C040 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM2Q9C040 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM2Q9C040 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM2Q9C040 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM2Q9C040 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
TRIM2Q9C040 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM2Q9C040 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM2Q9C040 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM2Q9C040 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM2Q9C040 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM2Q9C040 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRIM2Q9C040 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM2Q9C040 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRIM2Q9C040 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM2Q9C040 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM2Q9C040 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM2Q9C040 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM2Q9C040 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM2Q9C040 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM2Q9C040 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM2Q9C040 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM2Q9C040 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM2Q9C040 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TRIM2Q9C040 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM2Q9C040 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRIM2Q9C040 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM2Q9C040 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM2Q9C040 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM2Q9C040 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM2Q9C040 AC133561.1-201ENST00000568600 2415 ntBASIC20.66■□□□□ 0.9
TRIM2Q9C040 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM2Q9C040 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM2Q9C040 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM2Q9C040 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM2Q9C040 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM2Q9C040 SNX5-217ENST00000606557 1087 ntBASIC20.66■□□□□ 0.9
TRIM2Q9C040 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM2Q9C040 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRIM2Q9C040 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM2Q9C040 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM2Q9C040 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM2Q9C040 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM2Q9C040 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM2Q9C040 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM2Q9C040 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM2Q9C040 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM2Q9C040 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM2Q9C040 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.65■□□□□ 0.9
TRIM2Q9C040 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TRIM2Q9C040 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM2Q9C040 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM2Q9C040 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM2Q9C040 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRIM2Q9C040 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM2Q9C040 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
TRIM2Q9C040 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM2Q9C040 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRIM2Q9C040 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM2Q9C040 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM2Q9C040 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRIM2Q9C040 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM2Q9C040 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM2Q9C040 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM2Q9C040 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM2Q9C040 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM2Q9C040 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM2Q9C040 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRIM2Q9C040 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM2Q9C040 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.63■□□□□ 0.89
TRIM2Q9C040 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM2Q9C040 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms