Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 AP006294.2-201ENST00000641667 209 ntBASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP3Q9BZ76 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP3Q9BZ76 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP3Q9BZ76 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CNTNAP3Q9BZ76 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3Q9BZ76 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3Q9BZ76 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3Q9BZ76 POU5F1P3-201ENST00000428824 1078 ntBASIC21.64■■□□□ 1.05
CNTNAP3Q9BZ76 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3Q9BZ76 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.64■■□□□ 1.05
CNTNAP3Q9BZ76 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3Q9BZ76 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3Q9BZ76 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.64■■□□□ 1.05
CNTNAP3Q9BZ76 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.64■■□□□ 1.05
CNTNAP3Q9BZ76 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3Q9BZ76 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.63■■□□□ 1.05
CNTNAP3Q9BZ76 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CNTNAP3Q9BZ76 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP3Q9BZ76 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP3Q9BZ76 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP3Q9BZ76 AC009102.2-201ENST00000606772 1639 ntBASIC21.63■■□□□ 1.05
CNTNAP3Q9BZ76 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP3Q9BZ76 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
CNTNAP3Q9BZ76 AC069152.1-201ENST00000438030 544 ntBASIC21.63■■□□□ 1.05
CNTNAP3Q9BZ76 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.63■■□□□ 1.05
CNTNAP3Q9BZ76 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CNTNAP3Q9BZ76 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 PRORSD1P-201ENST00000295112 541 ntBASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP3Q9BZ76 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 TSPY6P-201ENST00000448518 926 ntBASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 AL121832.2-201ENST00000610979 668 ntBASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP3Q9BZ76 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP3Q9BZ76 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP3Q9BZ76 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CNTNAP3Q9BZ76 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
CNTNAP3Q9BZ76 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.6■■□□□ 1.05
CNTNAP3Q9BZ76 AL138781.1-201ENST00000566567 1274 ntBASIC21.6■■□□□ 1.05
CNTNAP3Q9BZ76 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.6■■□□□ 1.05
CNTNAP3Q9BZ76 AC009086.3-201ENST00000623486 1008 ntBASIC21.6■■□□□ 1.05
CNTNAP3Q9BZ76 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP3Q9BZ76 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CNTNAP3Q9BZ76 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP3Q9BZ76 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CNTNAP3Q9BZ76 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP3Q9BZ76 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP3Q9BZ76 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP3Q9BZ76 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.59■■□□□ 1.05
CNTNAP3Q9BZ76 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.59■■□□□ 1.05
CNTNAP3Q9BZ76 AC083906.2-201ENST00000511578 360 ntBASIC21.59■■□□□ 1.05
CNTNAP3Q9BZ76 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.59■■□□□ 1.05
CNTNAP3Q9BZ76 AC010331.1-201ENST00000611423 582 ntBASIC21.59■■□□□ 1.05
CNTNAP3Q9BZ76 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNTNAP3Q9BZ76 DRD5P2-201ENST00000421395 2012 ntBASIC21.58■■□□□ 1.05
CNTNAP3Q9BZ76 AC090877.2-201ENST00000558441 1738 ntBASIC21.58■■□□□ 1.05
CNTNAP3Q9BZ76 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.58■■□□□ 1.05
CNTNAP3Q9BZ76 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.58■■□□□ 1.05
CNTNAP3Q9BZ76 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNTNAP3Q9BZ76 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTNAP3Q9BZ76 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
CNTNAP3Q9BZ76 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CNTNAP3Q9BZ76 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTNAP3Q9BZ76 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.57■■□□□ 1.04
CNTNAP3Q9BZ76 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP3Q9BZ76 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP3Q9BZ76 AC011767.1-201ENST00000617410 1153 ntBASIC21.57■■□□□ 1.04
CNTNAP3Q9BZ76 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP3Q9BZ76 C17orf82-201ENST00000623772 1530 ntBASIC21.56■■□□□ 1.04
CNTNAP3Q9BZ76 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP3Q9BZ76 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.56■■□□□ 1.04
CNTNAP3Q9BZ76 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CNTNAP3Q9BZ76 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP3Q9BZ76 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP3Q9BZ76 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CNTNAP3Q9BZ76 AC135731.1-201ENST00000569415 2548 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms