Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC7.71□□□□□ -1.18
KRTAP4-3Q9BYR4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 AC105265.2-201ENST00000467189 838 ntBASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 AP001330.3-201ENST00000520123 633 ntBASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 AC008764.7-201ENST00000593779 1081 ntBASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 SYT6-210ENST00000641643 1587 ntBASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 AP003733.4-201ENST00000623785 1697 ntBASIC7.7□□□□□ -1.18
KRTAP4-3Q9BYR4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
KRTAP4-3Q9BYR4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 AC133561.4-201ENST00000566112 224 ntBASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 MIR3181-201ENST00000578512 73 ntBASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC7.68□□□□□ -1.18
KRTAP4-3Q9BYR4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 MIR939-201ENST00000401314 82 ntBASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 AC026271.2-201ENST00000428091 497 ntBASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC7.67□□□□□ -1.18
KRTAP4-3Q9BYR4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms