Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.98■□□□□ 0.79
USB1Q9BQ65 AC133561.4-201ENST00000566112 224 ntBASIC19.98■□□□□ 0.79
USB1Q9BQ65 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
USB1Q9BQ65 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USB1Q9BQ65 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USB1Q9BQ65 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USB1Q9BQ65 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
USB1Q9BQ65 AC142381.3-201ENST00000568208 1670 ntBASIC19.97■□□□□ 0.79
USB1Q9BQ65 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.97■□□□□ 0.79
USB1Q9BQ65 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.97■□□□□ 0.79
USB1Q9BQ65 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USB1Q9BQ65 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USB1Q9BQ65 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
USB1Q9BQ65 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.97■□□□□ 0.79
USB1Q9BQ65 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.97■□□□□ 0.79
USB1Q9BQ65 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USB1Q9BQ65 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USB1Q9BQ65 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.97■□□□□ 0.79
USB1Q9BQ65 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
USB1Q9BQ65 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
USB1Q9BQ65 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USB1Q9BQ65 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.96■□□□□ 0.79
USB1Q9BQ65 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
USB1Q9BQ65 AL024507.2-201ENST00000606070 2574 ntBASIC19.96■□□□□ 0.79
USB1Q9BQ65 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USB1Q9BQ65 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
USB1Q9BQ65 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USB1Q9BQ65 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
USB1Q9BQ65 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
USB1Q9BQ65 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USB1Q9BQ65 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USB1Q9BQ65 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
USB1Q9BQ65 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USB1Q9BQ65 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USB1Q9BQ65 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USB1Q9BQ65 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.95■□□□□ 0.78
USB1Q9BQ65 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.95■□□□□ 0.78
USB1Q9BQ65 AC019069.1-201ENST00000610008 1333 ntBASIC19.95■□□□□ 0.78
USB1Q9BQ65 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USB1Q9BQ65 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USB1Q9BQ65 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.94■□□□□ 0.78
USB1Q9BQ65 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
USB1Q9BQ65 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USB1Q9BQ65 HLA-L-211ENST00000482052 1765 ntBASIC19.94■□□□□ 0.78
USB1Q9BQ65 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.94■□□□□ 0.78
USB1Q9BQ65 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
USB1Q9BQ65 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
USB1Q9BQ65 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USB1Q9BQ65 AC022211.4-201ENST00000625094 2161 ntBASIC19.94■□□□□ 0.78
USB1Q9BQ65 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.93■□□□□ 0.78
USB1Q9BQ65 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USB1Q9BQ65 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USB1Q9BQ65 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USB1Q9BQ65 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
USB1Q9BQ65 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USB1Q9BQ65 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.93■□□□□ 0.78
USB1Q9BQ65 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.93■□□□□ 0.78
USB1Q9BQ65 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USB1Q9BQ65 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USB1Q9BQ65 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.93■□□□□ 0.78
USB1Q9BQ65 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USB1Q9BQ65 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USB1Q9BQ65 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.92■□□□□ 0.78
USB1Q9BQ65 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USB1Q9BQ65 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USB1Q9BQ65 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USB1Q9BQ65 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USB1Q9BQ65 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USB1Q9BQ65 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USB1Q9BQ65 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USB1Q9BQ65 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.92■□□□□ 0.78
USB1Q9BQ65 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.92■□□□□ 0.78
USB1Q9BQ65 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.92■□□□□ 0.78
USB1Q9BQ65 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USB1Q9BQ65 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USB1Q9BQ65 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USB1Q9BQ65 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.91■□□□□ 0.78
USB1Q9BQ65 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USB1Q9BQ65 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.91■□□□□ 0.78
USB1Q9BQ65 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.91■□□□□ 0.78
USB1Q9BQ65 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USB1Q9BQ65 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.91■□□□□ 0.78
USB1Q9BQ65 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USB1Q9BQ65 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.91■□□□□ 0.78
USB1Q9BQ65 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USB1Q9BQ65 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USB1Q9BQ65 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USB1Q9BQ65 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
USB1Q9BQ65 AC138932.3-201ENST00000567634 1902 ntBASIC19.9■□□□□ 0.78
USB1Q9BQ65 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USB1Q9BQ65 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USB1Q9BQ65 AC096631.2-201ENST00000436136 790 ntBASIC19.9■□□□□ 0.78
USB1Q9BQ65 AC241377.3-202ENST00000626088 1088 ntBASIC19.9■□□□□ 0.78
USB1Q9BQ65 AC241585.3-202ENST00000628937 1088 ntBASIC19.9■□□□□ 0.78
USB1Q9BQ65 AC245100.8-202ENST00000629247 1058 ntBASIC19.9■□□□□ 0.78
USB1Q9BQ65 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USB1Q9BQ65 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USB1Q9BQ65 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
USB1Q9BQ65 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
USB1Q9BQ65 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms