Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
BBS4Q96RK4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.34■■□□□ 1.01
BBS4Q96RK4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BBS4Q96RK4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.34■■□□□ 1.01
BBS4Q96RK4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.34■■□□□ 1.01
BBS4Q96RK4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.34■■□□□ 1.01
BBS4Q96RK4 Z92544.1-202ENST00000571933 1220 ntBASIC21.34■■□□□ 1.01
BBS4Q96RK4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BBS4Q96RK4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BBS4Q96RK4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BBS4Q96RK4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BBS4Q96RK4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BBS4Q96RK4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
BBS4Q96RK4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
BBS4Q96RK4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BBS4Q96RK4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BBS4Q96RK4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BBS4Q96RK4 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.33■■□□□ 1.01
BBS4Q96RK4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
BBS4Q96RK4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.33■■□□□ 1
BBS4Q96RK4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
BBS4Q96RK4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.33■■□□□ 1
BBS4Q96RK4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
BBS4Q96RK4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BBS4Q96RK4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.32■■□□□ 1
BBS4Q96RK4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BBS4Q96RK4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
BBS4Q96RK4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.32■■□□□ 1
BBS4Q96RK4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.32■■□□□ 1
BBS4Q96RK4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BBS4Q96RK4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.32■■□□□ 1
BBS4Q96RK4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
BBS4Q96RK4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.31■■□□□ 1
BBS4Q96RK4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.31■■□□□ 1
BBS4Q96RK4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BBS4Q96RK4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
BBS4Q96RK4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BBS4Q96RK4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.31■■□□□ 1
BBS4Q96RK4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.31■■□□□ 1
BBS4Q96RK4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
BBS4Q96RK4 AC239859.2-201ENST00000444165 318 ntBASIC21.31■■□□□ 1
BBS4Q96RK4 AC009299.2-201ENST00000482477 511 ntBASIC21.31■■□□□ 1
BBS4Q96RK4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
BBS4Q96RK4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
BBS4Q96RK4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.31■■□□□ 1
BBS4Q96RK4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.3■■□□□ 1
BBS4Q96RK4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BBS4Q96RK4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
BBS4Q96RK4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BBS4Q96RK4 AL451085.2-201ENST00000605085 799 ntBASIC21.3■■□□□ 1
BBS4Q96RK4 MIR4787-201ENST00000607364 84 ntBASIC21.3■■□□□ 1
BBS4Q96RK4 AC092028.1-203ENST00000608262 953 ntBASIC21.3■■□□□ 1
BBS4Q96RK4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.3■■□□□ 1
BBS4Q96RK4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.3■■□□□ 1
BBS4Q96RK4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.3■■□□□ 1
BBS4Q96RK4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.3■■□□□ 1
BBS4Q96RK4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.3■■□□□ 1
BBS4Q96RK4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
BBS4Q96RK4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.3■■□□□ 1
BBS4Q96RK4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
BBS4Q96RK4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.29■■□□□ 1
BBS4Q96RK4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BBS4Q96RK4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
BBS4Q96RK4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.29■■□□□ 1
BBS4Q96RK4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.29■■□□□ 1
BBS4Q96RK4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.29■■□□□ 1
BBS4Q96RK4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
BBS4Q96RK4 MIR6722-201ENST00000617286 78 ntBASIC21.29■■□□□ 1
BBS4Q96RK4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BBS4Q96RK4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
BBS4Q96RK4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.29■■□□□ 1
BBS4Q96RK4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.29■■□□□ 1
BBS4Q96RK4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
BBS4Q96RK4 AC092068.2-201ENST00000590491 1708 ntBASIC21.29■■□□□ 1
BBS4Q96RK4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
BBS4Q96RK4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BBS4Q96RK4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
BBS4Q96RK4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BBS4Q96RK4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BBS4Q96RK4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.28■■□□□ 1
BBS4Q96RK4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
BBS4Q96RK4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.28■■□□□ 1
BBS4Q96RK4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.28■■□□□ 1
BBS4Q96RK4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
BBS4Q96RK4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BBS4Q96RK4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
BBS4Q96RK4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.28■■□□□ 1
BBS4Q96RK4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.28■■□□□ 1
BBS4Q96RK4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BBS4Q96RK4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BBS4Q96RK4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BBS4Q96RK4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.28■■□□□ 1
BBS4Q96RK4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BBS4Q96RK4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.28■■□□□ 1
BBS4Q96RK4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.27■■□□□ 1
BBS4Q96RK4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
BBS4Q96RK4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.27■■□□□ 1
BBS4Q96RK4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BBS4Q96RK4 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.27■■□□□ 1
BBS4Q96RK4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms