Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.68■□□□□ 0.26
ODF3Q96PU9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.68■□□□□ 0.26
ODF3Q96PU9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ODF3Q96PU9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ODF3Q96PU9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ODF3Q96PU9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.67■□□□□ 0.26
ODF3Q96PU9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ODF3Q96PU9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
ODF3Q96PU9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.67■□□□□ 0.26
ODF3Q96PU9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.67■□□□□ 0.26
ODF3Q96PU9 AL031848.2-201ENST00000607670 837 ntBASIC16.67■□□□□ 0.26
ODF3Q96PU9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ODF3Q96PU9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ODF3Q96PU9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ODF3Q96PU9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.67■□□□□ 0.26
ODF3Q96PU9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ODF3Q96PU9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ODF3Q96PU9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ODF3Q96PU9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.66■□□□□ 0.26
ODF3Q96PU9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.66■□□□□ 0.26
ODF3Q96PU9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ODF3Q96PU9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ODF3Q96PU9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ODF3Q96PU9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ODF3Q96PU9 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.65■□□□□ 0.26
ODF3Q96PU9 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.65■□□□□ 0.26
ODF3Q96PU9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ODF3Q96PU9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.65■□□□□ 0.26
ODF3Q96PU9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.65■□□□□ 0.26
ODF3Q96PU9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ODF3Q96PU9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.65■□□□□ 0.26
ODF3Q96PU9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ODF3Q96PU9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.65■□□□□ 0.26
ODF3Q96PU9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.65■□□□□ 0.26
ODF3Q96PU9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ODF3Q96PU9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.65■□□□□ 0.26
ODF3Q96PU9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.65■□□□□ 0.26
ODF3Q96PU9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ODF3Q96PU9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.65■□□□□ 0.26
ODF3Q96PU9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
ODF3Q96PU9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ODF3Q96PU9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ODF3Q96PU9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.64■□□□□ 0.25
ODF3Q96PU9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.64■□□□□ 0.25
ODF3Q96PU9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ODF3Q96PU9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ODF3Q96PU9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ODF3Q96PU9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ODF3Q96PU9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ODF3Q96PU9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ODF3Q96PU9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ODF3Q96PU9 AC079630.1-202ENST00000618127 1840 ntBASIC16.63■□□□□ 0.25
ODF3Q96PU9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ODF3Q96PU9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ODF3Q96PU9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ODF3Q96PU9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.63■□□□□ 0.25
ODF3Q96PU9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ODF3Q96PU9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ODF3Q96PU9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.63■□□□□ 0.25
ODF3Q96PU9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.63■□□□□ 0.25
ODF3Q96PU9 MIR6722-201ENST00000617286 78 ntBASIC16.63■□□□□ 0.25
ODF3Q96PU9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ODF3Q96PU9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ODF3Q96PU9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ODF3Q96PU9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ODF3Q96PU9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ODF3Q96PU9 KRT8P33-201ENST00000508125 1423 ntBASIC16.62■□□□□ 0.25
ODF3Q96PU9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ODF3Q96PU9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ODF3Q96PU9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ODF3Q96PU9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ODF3Q96PU9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ODF3Q96PU9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ODF3Q96PU9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.62■□□□□ 0.25
ODF3Q96PU9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ODF3Q96PU9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ODF3Q96PU9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ODF3Q96PU9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms