Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CALR3Q96L12 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CALR3Q96L12 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.87■■□□□ 1.41
CALR3Q96L12 AC120024.1-201ENST00000562672 995 ntBASIC23.87■■□□□ 1.41
CALR3Q96L12 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CALR3Q96L12 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CALR3Q96L12 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CALR3Q96L12 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.87■■□□□ 1.41
CALR3Q96L12 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.87■■□□□ 1.41
CALR3Q96L12 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.86■■□□□ 1.41
CALR3Q96L12 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CALR3Q96L12 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CALR3Q96L12 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.86■■□□□ 1.41
CALR3Q96L12 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CALR3Q96L12 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CALR3Q96L12 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.86■■□□□ 1.41
CALR3Q96L12 ABHD17AP5-201ENST00000580133 923 ntBASIC23.86■■□□□ 1.41
CALR3Q96L12 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.86■■□□□ 1.41
CALR3Q96L12 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
CALR3Q96L12 EP400NL-214ENST00000641289 2402 ntBASIC23.85■■□□□ 1.41
CALR3Q96L12 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CALR3Q96L12 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.85■■□□□ 1.41
CALR3Q96L12 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CALR3Q96L12 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CALR3Q96L12 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CALR3Q96L12 NTF6A-201ENST00000591175 560 ntBASIC23.85■■□□□ 1.41
CALR3Q96L12 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CALR3Q96L12 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CALR3Q96L12 ESRRAP2-201ENST00000418437 1549 ntBASIC23.84■■□□□ 1.41
CALR3Q96L12 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CALR3Q96L12 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CALR3Q96L12 C1orf229-201ENST00000623686 2258 ntBASIC23.84■■□□□ 1.41
CALR3Q96L12 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CALR3Q96L12 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CALR3Q96L12 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CALR3Q96L12 AC004448.1-201ENST00000458332 883 ntBASIC23.84■■□□□ 1.41
CALR3Q96L12 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.84■■□□□ 1.41
CALR3Q96L12 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.84■■□□□ 1.41
CALR3Q96L12 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CALR3Q96L12 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CALR3Q96L12 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CALR3Q96L12 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CALR3Q96L12 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CALR3Q96L12 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CALR3Q96L12 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.83■■□□□ 1.41
CALR3Q96L12 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CALR3Q96L12 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CALR3Q96L12 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CALR3Q96L12 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CALR3Q96L12 AF131216.4-201ENST00000638924 1588 ntBASIC23.82■■□□□ 1.4
CALR3Q96L12 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CALR3Q96L12 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CALR3Q96L12 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.82■■□□□ 1.4
CALR3Q96L12 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CALR3Q96L12 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CALR3Q96L12 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.82■■□□□ 1.4
CALR3Q96L12 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CALR3Q96L12 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CALR3Q96L12 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CALR3Q96L12 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CALR3Q96L12 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.81■■□□□ 1.4
CALR3Q96L12 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CALR3Q96L12 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.81■■□□□ 1.4
CALR3Q96L12 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CALR3Q96L12 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CALR3Q96L12 THA1P-201ENST00000590384 1145 ntBASIC23.81■■□□□ 1.4
CALR3Q96L12 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CALR3Q96L12 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CALR3Q96L12 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CALR3Q96L12 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CALR3Q96L12 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CALR3Q96L12 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CALR3Q96L12 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CALR3Q96L12 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CALR3Q96L12 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CALR3Q96L12 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CALR3Q96L12 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CALR3Q96L12 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CALR3Q96L12 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CALR3Q96L12 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CALR3Q96L12 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.79■■□□□ 1.4
CALR3Q96L12 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.79■■□□□ 1.4
CALR3Q96L12 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CALR3Q96L12 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CALR3Q96L12 DUX4L18-201ENST00000553347 1267 ntBASIC23.79■■□□□ 1.4
CALR3Q96L12 MIR4281-201ENST00000580852 62 ntBASIC23.79■■□□□ 1.4
CALR3Q96L12 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.79■■□□□ 1.4
CALR3Q96L12 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CALR3Q96L12 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CALR3Q96L12 LINC00565-201ENST00000562710 2331 ntBASIC23.79■■□□□ 1.4
CALR3Q96L12 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CALR3Q96L12 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.79■■□□□ 1.4
CALR3Q96L12 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CALR3Q96L12 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.78■■□□□ 1.4
CALR3Q96L12 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALR3Q96L12 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALR3Q96L12 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.78■■□□□ 1.4
CALR3Q96L12 BHLHE23-202ENST00000612929 1109 ntBASIC23.78■■□□□ 1.4
CALR3Q96L12 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CALR3Q96L12 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms