Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
PHACTR3Q96KR7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PHACTR3Q96KR7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PHACTR3Q96KR7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC29.84■■■□□ 2.37
PHACTR3Q96KR7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC29.84■■■□□ 2.37
PHACTR3Q96KR7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
PHACTR3Q96KR7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC29.83■■■□□ 2.37
PHACTR3Q96KR7 SUDS3P1-201ENST00000505831 966 ntBASIC29.83■■■□□ 2.37
PHACTR3Q96KR7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
PHACTR3Q96KR7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC29.82■■■□□ 2.36
PHACTR3Q96KR7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
PHACTR3Q96KR7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PHACTR3Q96KR7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.82■■■□□ 2.36
PHACTR3Q96KR7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PHACTR3Q96KR7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PHACTR3Q96KR7 SYT6-210ENST00000641643 1587 ntBASIC29.81■■■□□ 2.36
PHACTR3Q96KR7 ABCB10P4-201ENST00000566803 2184 ntBASIC29.81■■■□□ 2.36
PHACTR3Q96KR7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PHACTR3Q96KR7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC29.81■■■□□ 2.36
PHACTR3Q96KR7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29.81■■■□□ 2.36
PHACTR3Q96KR7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
PHACTR3Q96KR7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC29.81■■■□□ 2.36
PHACTR3Q96KR7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
PHACTR3Q96KR7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC29.81■■■□□ 2.36
PHACTR3Q96KR7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 SF1-220ENST00000626028 704 ntTSL 2 BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC29.8■■■□□ 2.36
PHACTR3Q96KR7 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.79■■■□□ 2.36
PHACTR3Q96KR7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.79■■■□□ 2.36
PHACTR3Q96KR7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.79■■■□□ 2.36
PHACTR3Q96KR7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
PHACTR3Q96KR7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PHACTR3Q96KR7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PHACTR3Q96KR7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PHACTR3Q96KR7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PHACTR3Q96KR7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.78■■■□□ 2.36
PHACTR3Q96KR7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PHACTR3Q96KR7 DUX4L19-201ENST00000557448 1267 ntBASIC29.78■■■□□ 2.36
PHACTR3Q96KR7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.78■■■□□ 2.36
PHACTR3Q96KR7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PHACTR3Q96KR7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PHACTR3Q96KR7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC29.77■■■□□ 2.36
PHACTR3Q96KR7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PHACTR3Q96KR7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
PHACTR3Q96KR7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.77■■■□□ 2.36
PHACTR3Q96KR7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.77■■■□□ 2.36
PHACTR3Q96KR7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC29.77■■■□□ 2.36
PHACTR3Q96KR7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PHACTR3Q96KR7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
PHACTR3Q96KR7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC29.76■■■□□ 2.36
PHACTR3Q96KR7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.76■■■□□ 2.35
PHACTR3Q96KR7 AC241377.3-202ENST00000626088 1088 ntBASIC29.76■■■□□ 2.35
PHACTR3Q96KR7 AC241585.3-202ENST00000628937 1088 ntBASIC29.76■■■□□ 2.35
PHACTR3Q96KR7 AC245100.8-202ENST00000629247 1058 ntBASIC29.76■■■□□ 2.35
PHACTR3Q96KR7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PHACTR3Q96KR7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PHACTR3Q96KR7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PHACTR3Q96KR7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PHACTR3Q96KR7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC29.75■■■□□ 2.35
PHACTR3Q96KR7 MIR3181-201ENST00000578512 73 ntBASIC29.75■■■□□ 2.35
PHACTR3Q96KR7 MIR4767-201ENST00000582827 78 ntBASIC29.75■■■□□ 2.35
PHACTR3Q96KR7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PHACTR3Q96KR7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.75■■■□□ 2.35
PHACTR3Q96KR7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PHACTR3Q96KR7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC29.75■■■□□ 2.35
PHACTR3Q96KR7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
PHACTR3Q96KR7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
PHACTR3Q96KR7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.74■■■□□ 2.35
PHACTR3Q96KR7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC29.74■■■□□ 2.35
PHACTR3Q96KR7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
PHACTR3Q96KR7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PHACTR3Q96KR7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
PHACTR3Q96KR7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
PHACTR3Q96KR7 AC092171.4-201ENST00000609130 632 ntBASIC29.73■■■□□ 2.35
PHACTR3Q96KR7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PHACTR3Q96KR7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 EDA-201ENST00000338901 1233 ntBASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 AC009086.3-201ENST00000623486 1008 ntBASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 AL136967.2-201ENST00000623968 743 ntBASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
PHACTR3Q96KR7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PHACTR3Q96KR7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.71■■■□□ 2.35
PHACTR3Q96KR7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.71■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms