Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMD4Q96H15 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMD4Q96H15 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMD4Q96H15 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TIMD4Q96H15 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMD4Q96H15 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMD4Q96H15 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMD4Q96H15 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.97■□□□□ 0.63
TIMD4Q96H15 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMD4Q96H15 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.97■□□□□ 0.63
TIMD4Q96H15 C17orf82-201ENST00000623772 1530 ntBASIC18.97■□□□□ 0.63
TIMD4Q96H15 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TIMD4Q96H15 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.97■□□□□ 0.63
TIMD4Q96H15 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMD4Q96H15 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.97■□□□□ 0.63
TIMD4Q96H15 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMD4Q96H15 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMD4Q96H15 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMD4Q96H15 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMD4Q96H15 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMD4Q96H15 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.96■□□□□ 0.63
TIMD4Q96H15 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
TIMD4Q96H15 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMD4Q96H15 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TIMD4Q96H15 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMD4Q96H15 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.96■□□□□ 0.63
TIMD4Q96H15 AC099791.2-201ENST00000605725 427 ntBASIC18.96■□□□□ 0.63
TIMD4Q96H15 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMD4Q96H15 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMD4Q96H15 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIMD4Q96H15 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TIMD4Q96H15 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMD4Q96H15 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TIMD4Q96H15 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMD4Q96H15 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.95■□□□□ 0.62
TIMD4Q96H15 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMD4Q96H15 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.95■□□□□ 0.62
TIMD4Q96H15 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMD4Q96H15 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMD4Q96H15 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
TIMD4Q96H15 AC005837.3-201ENST00000612163 286 ntBASIC18.95■□□□□ 0.62
TIMD4Q96H15 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMD4Q96H15 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.95■□□□□ 0.62
TIMD4Q96H15 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TIMD4Q96H15 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TIMD4Q96H15 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.94■□□□□ 0.62
TIMD4Q96H15 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TIMD4Q96H15 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.94■□□□□ 0.62
TIMD4Q96H15 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TIMD4Q96H15 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TIMD4Q96H15 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.94■□□□□ 0.62
TIMD4Q96H15 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TIMD4Q96H15 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMD4Q96H15 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMD4Q96H15 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMD4Q96H15 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMD4Q96H15 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMD4Q96H15 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.93■□□□□ 0.62
TIMD4Q96H15 AL138724.1-201ENST00000606771 1088 ntBASIC18.93■□□□□ 0.62
TIMD4Q96H15 AC009086.3-201ENST00000623486 1008 ntBASIC18.93■□□□□ 0.62
TIMD4Q96H15 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMD4Q96H15 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMD4Q96H15 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TIMD4Q96H15 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMD4Q96H15 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TIMD4Q96H15 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TIMD4Q96H15 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TIMD4Q96H15 EDA-201ENST00000338901 1233 ntBASIC18.92■□□□□ 0.62
TIMD4Q96H15 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.92■□□□□ 0.62
TIMD4Q96H15 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
TIMD4Q96H15 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.92■□□□□ 0.62
TIMD4Q96H15 AC024257.2-201ENST00000549699 147 ntBASIC18.92■□□□□ 0.62
TIMD4Q96H15 AC142381.2-201ENST00000566120 298 ntBASIC18.92■□□□□ 0.62
TIMD4Q96H15 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.92■□□□□ 0.62
TIMD4Q96H15 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TIMD4Q96H15 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TIMD4Q96H15 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TIMD4Q96H15 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TIMD4Q96H15 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.91■□□□□ 0.62
TIMD4Q96H15 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.91■□□□□ 0.62
TIMD4Q96H15 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMD4Q96H15 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMD4Q96H15 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TIMD4Q96H15 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMD4Q96H15 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMD4Q96H15 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TIMD4Q96H15 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMD4Q96H15 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMD4Q96H15 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMD4Q96H15 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.9■□□□□ 0.62
TIMD4Q96H15 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.9■□□□□ 0.62
TIMD4Q96H15 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TIMD4Q96H15 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMD4Q96H15 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TIMD4Q96H15 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.9■□□□□ 0.62
TIMD4Q96H15 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.9■□□□□ 0.62
TIMD4Q96H15 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TIMD4Q96H15 LINC01124-201ENST00000409786 2117 ntBASIC18.89■□□□□ 0.62
TIMD4Q96H15 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TIMD4Q96H15 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms