Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM11Q96F44 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
TRIM11Q96F44 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM11Q96F44 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM11Q96F44 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM11Q96F44 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM11Q96F44 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TRIM11Q96F44 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM11Q96F44 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM11Q96F44 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM11Q96F44 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
TRIM11Q96F44 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TRIM11Q96F44 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM11Q96F44 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM11Q96F44 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM11Q96F44 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM11Q96F44 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM11Q96F44 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM11Q96F44 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.86■■□□□ 1.41
TRIM11Q96F44 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
TRIM11Q96F44 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM11Q96F44 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM11Q96F44 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM11Q96F44 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM11Q96F44 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM11Q96F44 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM11Q96F44 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM11Q96F44 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM11Q96F44 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM11Q96F44 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.85■■□□□ 1.41
TRIM11Q96F44 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM11Q96F44 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.85■■□□□ 1.41
TRIM11Q96F44 BX664725.1-201ENST00000438252 379 ntBASIC23.85■■□□□ 1.41
TRIM11Q96F44 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM11Q96F44 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.85■■□□□ 1.41
TRIM11Q96F44 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.85■■□□□ 1.41
TRIM11Q96F44 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
TRIM11Q96F44 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM11Q96F44 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
TRIM11Q96F44 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM11Q96F44 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM11Q96F44 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM11Q96F44 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM11Q96F44 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM11Q96F44 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM11Q96F44 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TRIM11Q96F44 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM11Q96F44 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM11Q96F44 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM11Q96F44 C9orf163-202ENST00000624034 2573 ntBASIC23.84■■□□□ 1.41
TRIM11Q96F44 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
TRIM11Q96F44 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM11Q96F44 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM11Q96F44 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TRIM11Q96F44 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM11Q96F44 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
TRIM11Q96F44 AC021242.3-201ENST00000607598 1377 ntBASIC23.83■■□□□ 1.41
TRIM11Q96F44 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM11Q96F44 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.83■■□□□ 1.41
TRIM11Q96F44 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.83■■□□□ 1.41
TRIM11Q96F44 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM11Q96F44 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TRIM11Q96F44 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
TRIM11Q96F44 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM11Q96F44 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.83■■□□□ 1.4
TRIM11Q96F44 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.83■■□□□ 1.4
TRIM11Q96F44 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM11Q96F44 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM11Q96F44 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM11Q96F44 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM11Q96F44 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM11Q96F44 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM11Q96F44 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM11Q96F44 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
TRIM11Q96F44 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM11Q96F44 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM11Q96F44 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM11Q96F44 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM11Q96F44 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM11Q96F44 AC079630.1-202ENST00000618127 1840 ntBASIC23.82■■□□□ 1.4
TRIM11Q96F44 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.81■■□□□ 1.4
TRIM11Q96F44 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.81■■□□□ 1.4
TRIM11Q96F44 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM11Q96F44 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM11Q96F44 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TRIM11Q96F44 MIR6722-201ENST00000617286 78 ntBASIC23.81■■□□□ 1.4
TRIM11Q96F44 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.81■■□□□ 1.4
TRIM11Q96F44 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM11Q96F44 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.81■■□□□ 1.4
TRIM11Q96F44 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM11Q96F44 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM11Q96F44 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM11Q96F44 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.8■■□□□ 1.4
TRIM11Q96F44 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM11Q96F44 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM11Q96F44 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.8■■□□□ 1.4
TRIM11Q96F44 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM11Q96F44 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TRIM11Q96F44 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.79■■□□□ 1.4
TRIM11Q96F44 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms