Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB39BQ96DA2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB39BQ96DA2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB39BQ96DA2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 AL139246.5-201ENST00000606645 996 ntBASIC19.19■□□□□ 0.66
RAB39BQ96DA2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAB39BQ96DA2 AC005703.6-201ENST00000623265 1329 ntBASIC19.19■□□□□ 0.66
RAB39BQ96DA2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAB39BQ96DA2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RAB39BQ96DA2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB39BQ96DA2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB39BQ96DA2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB39BQ96DA2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB39BQ96DA2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB39BQ96DA2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB39BQ96DA2 AL512631.2-201ENST00000604634 923 ntBASIC19.17■□□□□ 0.66
RAB39BQ96DA2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB39BQ96DA2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB39BQ96DA2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 AC141586.4-201ENST00000624558 1573 ntBASIC19.16■□□□□ 0.66
RAB39BQ96DA2 MIR4466-201ENST00000606121 54 ntBASIC19.16■□□□□ 0.66
RAB39BQ96DA2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB39BQ96DA2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB39BQ96DA2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB39BQ96DA2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB39BQ96DA2 AL022069.1-201ENST00000568025 1636 ntBASIC19.15■□□□□ 0.66
RAB39BQ96DA2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAB39BQ96DA2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB39BQ96DA2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB39BQ96DA2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB39BQ96DA2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms