Protein–RNA interactions for Protein: Q96AT9

RPE, Ribulose-phosphate 3-epimerase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPEQ96AT9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.39■□□□□ 0.53
RPEQ96AT9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.39■□□□□ 0.53
RPEQ96AT9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RPEQ96AT9 MIR6724-1-201ENST00000616420 92 ntBASIC18.39■□□□□ 0.53
RPEQ96AT9 MIR6724-2-201ENST00000616483 92 ntBASIC18.39■□□□□ 0.53
RPEQ96AT9 MIR6724-4-201ENST00000617390 92 ntBASIC18.39■□□□□ 0.53
RPEQ96AT9 MIR6724-3-201ENST00000622482 92 ntBASIC18.39■□□□□ 0.53
RPEQ96AT9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPEQ96AT9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPEQ96AT9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPEQ96AT9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPEQ96AT9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RPEQ96AT9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RPEQ96AT9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RPEQ96AT9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPEQ96AT9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.38■□□□□ 0.53
RPEQ96AT9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPEQ96AT9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPEQ96AT9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPEQ96AT9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPEQ96AT9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RPEQ96AT9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPEQ96AT9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPEQ96AT9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPEQ96AT9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.37■□□□□ 0.53
RPEQ96AT9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPEQ96AT9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPEQ96AT9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPEQ96AT9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.37■□□□□ 0.53
RPEQ96AT9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.37■□□□□ 0.53
RPEQ96AT9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPEQ96AT9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.37■□□□□ 0.53
RPEQ96AT9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPEQ96AT9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPEQ96AT9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPEQ96AT9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPEQ96AT9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RPEQ96AT9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPEQ96AT9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPEQ96AT9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPEQ96AT9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RPEQ96AT9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.36■□□□□ 0.53
RPEQ96AT9 AL356441.2-201ENST00000443009 864 ntBASIC18.36■□□□□ 0.53
RPEQ96AT9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RPEQ96AT9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPEQ96AT9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.35■□□□□ 0.53
RPEQ96AT9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPEQ96AT9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPEQ96AT9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RPEQ96AT9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.35■□□□□ 0.53
RPEQ96AT9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.35■□□□□ 0.53
RPEQ96AT9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RPEQ96AT9 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.35■□□□□ 0.53
RPEQ96AT9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.35■□□□□ 0.53
RPEQ96AT9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RPEQ96AT9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RPEQ96AT9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPEQ96AT9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPEQ96AT9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPEQ96AT9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.34■□□□□ 0.53
RPEQ96AT9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPEQ96AT9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RPEQ96AT9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPEQ96AT9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.34■□□□□ 0.53
RPEQ96AT9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPEQ96AT9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.34■□□□□ 0.53
RPEQ96AT9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPEQ96AT9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPEQ96AT9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPEQ96AT9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPEQ96AT9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RPEQ96AT9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.53
RPEQ96AT9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPEQ96AT9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPEQ96AT9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RPEQ96AT9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.33■□□□□ 0.52
RPEQ96AT9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.33■□□□□ 0.52
RPEQ96AT9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPEQ96AT9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPEQ96AT9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPEQ96AT9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPEQ96AT9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.32■□□□□ 0.52
RPEQ96AT9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPEQ96AT9 AL356740.2-201ENST00000601559 647 ntBASIC18.32■□□□□ 0.52
RPEQ96AT9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPEQ96AT9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPEQ96AT9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPEQ96AT9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPEQ96AT9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPEQ96AT9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPEQ96AT9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RPEQ96AT9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RPEQ96AT9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.31■□□□□ 0.52
RPEQ96AT9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPEQ96AT9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPEQ96AT9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPEQ96AT9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPEQ96AT9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RPEQ96AT9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RPEQ96AT9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms