Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM10Q969L4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LSM10Q969L4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LSM10Q969L4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM10Q969L4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LSM10Q969L4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM10Q969L4 HSD17B1P1-201ENST00000590052 955 ntBASIC18.4■□□□□ 0.54
LSM10Q969L4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM10Q969L4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM10Q969L4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM10Q969L4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM10Q969L4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LSM10Q969L4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
LSM10Q969L4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LSM10Q969L4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM10Q969L4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.39■□□□□ 0.53
LSM10Q969L4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM10Q969L4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSM10Q969L4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM10Q969L4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LSM10Q969L4 ALDH1A3-203ENST00000557963 1670 ntBASIC18.39■□□□□ 0.53
LSM10Q969L4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.39■□□□□ 0.53
LSM10Q969L4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
LSM10Q969L4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.39■□□□□ 0.53
LSM10Q969L4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM10Q969L4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.39■□□□□ 0.53
LSM10Q969L4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM10Q969L4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM10Q969L4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM10Q969L4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.38■□□□□ 0.53
LSM10Q969L4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM10Q969L4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.38■□□□□ 0.53
LSM10Q969L4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LSM10Q969L4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
LSM10Q969L4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM10Q969L4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM10Q969L4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM10Q969L4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.37■□□□□ 0.53
LSM10Q969L4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LSM10Q969L4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM10Q969L4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.37■□□□□ 0.53
LSM10Q969L4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM10Q969L4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
LSM10Q969L4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.37■□□□□ 0.53
LSM10Q969L4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM10Q969L4 AC242852.2-201ENST00000615738 1807 ntBASIC18.37■□□□□ 0.53
LSM10Q969L4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM10Q969L4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.37■□□□□ 0.53
LSM10Q969L4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.36■□□□□ 0.53
LSM10Q969L4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM10Q969L4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM10Q969L4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM10Q969L4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM10Q969L4 U85056.1-201ENST00000616429 682 ntBASIC18.36■□□□□ 0.53
LSM10Q969L4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM10Q969L4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM10Q969L4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM10Q969L4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.35■□□□□ 0.53
LSM10Q969L4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM10Q969L4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LSM10Q969L4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM10Q969L4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM10Q969L4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM10Q969L4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.35■□□□□ 0.53
LSM10Q969L4 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.35■□□□□ 0.53
LSM10Q969L4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.35■□□□□ 0.53
LSM10Q969L4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LSM10Q969L4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM10Q969L4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM10Q969L4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM10Q969L4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM10Q969L4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM10Q969L4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.34■□□□□ 0.53
LSM10Q969L4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LSM10Q969L4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.34■□□□□ 0.53
LSM10Q969L4 AC129492.7-201ENST00000622992 756 ntBASIC18.34■□□□□ 0.53
LSM10Q969L4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LSM10Q969L4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.34■□□□□ 0.53
LSM10Q969L4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM10Q969L4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM10Q969L4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM10Q969L4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LSM10Q969L4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LSM10Q969L4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LSM10Q969L4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LSM10Q969L4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LSM10Q969L4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LSM10Q969L4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LSM10Q969L4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LSM10Q969L4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LSM10Q969L4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSM10Q969L4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSM10Q969L4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LSM10Q969L4 LONRF2P2-201ENST00000439212 571 ntBASIC18.33■□□□□ 0.52
LSM10Q969L4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LSM10Q969L4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.33■□□□□ 0.52
LSM10Q969L4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LSM10Q969L4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSM10Q969L4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.33■□□□□ 0.52
LSM10Q969L4 AC131274.2-201ENST00000580697 1507 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms