Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RPGRQ92834 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
RPGRQ92834 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RPGRQ92834 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RPGRQ92834 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RPGRQ92834 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.11■■■□□ 2.09
RPGRQ92834 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RPGRQ92834 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.11■■■□□ 2.09
RPGRQ92834 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC28.11■■■□□ 2.09
RPGRQ92834 AC022517.1-201ENST00000592429 346 ntBASIC28.11■■■□□ 2.09
RPGRQ92834 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RPGRQ92834 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RPGRQ92834 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RPGRQ92834 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.1■■■□□ 2.09
RPGRQ92834 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.1■■■□□ 2.09
RPGRQ92834 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.1■■■□□ 2.09
RPGRQ92834 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RPGRQ92834 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.1■■■□□ 2.09
RPGRQ92834 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
RPGRQ92834 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RPGRQ92834 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.1■■■□□ 2.09
RPGRQ92834 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RPGRQ92834 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
RPGRQ92834 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RPGRQ92834 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RPGRQ92834 KRT18P5-201ENST00000436075 1291 ntBASIC28.09■■■□□ 2.09
RPGRQ92834 AC090192.1-201ENST00000517740 490 ntBASIC28.09■■■□□ 2.09
RPGRQ92834 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.09■■■□□ 2.09
RPGRQ92834 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.09■■■□□ 2.09
RPGRQ92834 RARRES2P11-201ENST00000635158 484 ntBASIC28.09■■■□□ 2.09
RPGRQ92834 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RPGRQ92834 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.08■■■□□ 2.09
RPGRQ92834 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
RPGRQ92834 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
RPGRQ92834 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
RPGRQ92834 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC28.08■■■□□ 2.09
RPGRQ92834 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.08■■■□□ 2.09
RPGRQ92834 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.08■■■□□ 2.09
RPGRQ92834 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC28.08■■■□□ 2.09
RPGRQ92834 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.08■■■□□ 2.09
RPGRQ92834 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RPGRQ92834 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.07■■■□□ 2.08
RPGRQ92834 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RPGRQ92834 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.07■■■□□ 2.08
RPGRQ92834 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.07■■■□□ 2.08
RPGRQ92834 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.07■■■□□ 2.08
RPGRQ92834 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC28.07■■■□□ 2.08
RPGRQ92834 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC28.07■■■□□ 2.08
RPGRQ92834 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.06■■■□□ 2.08
RPGRQ92834 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RPGRQ92834 AL137784.2-201ENST00000607332 1000 ntBASIC28.06■■■□□ 2.08
RPGRQ92834 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.06■■■□□ 2.08
RPGRQ92834 AL358852.1-201ENST00000623174 1268 ntBASIC28.06■■■□□ 2.08
RPGRQ92834 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RPGRQ92834 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.06■■■□□ 2.08
RPGRQ92834 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
RPGRQ92834 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RPGRQ92834 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RPGRQ92834 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RPGRQ92834 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC28.05■■■□□ 2.08
RPGRQ92834 IGHV3-19-201ENST00000521488 291 ntBASIC28.05■■■□□ 2.08
RPGRQ92834 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.05■■■□□ 2.08
RPGRQ92834 DUX4L2-201ENST00000561772 1275 ntBASIC28.05■■■□□ 2.08
RPGRQ92834 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.05■■■□□ 2.08
RPGRQ92834 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.05■■■□□ 2.08
RPGRQ92834 DUX4L6-201ENST00000626483 1275 ntBASIC28.05■■■□□ 2.08
RPGRQ92834 DUX4L1-201ENST00000627662 1275 ntBASIC28.05■■■□□ 2.08
RPGRQ92834 DUX4L8-201ENST00000629013 1275 ntBASIC28.05■■■□□ 2.08
RPGRQ92834 DUX4L3-201ENST00000630187 1275 ntBASIC28.05■■■□□ 2.08
RPGRQ92834 DUX4L7-201ENST00000630678 1275 ntBASIC28.05■■■□□ 2.08
RPGRQ92834 DUX4L5-201ENST00000630834 1275 ntBASIC28.05■■■□□ 2.08
RPGRQ92834 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.04■■■□□ 2.08
RPGRQ92834 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RPGRQ92834 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
RPGRQ92834 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.04■■■□□ 2.08
RPGRQ92834 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.04■■■□□ 2.08
RPGRQ92834 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.03■■■□□ 2.08
RPGRQ92834 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.03■■■□□ 2.08
RPGRQ92834 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28.03■■■□□ 2.08
RPGRQ92834 AC027612.3-201ENST00000413684 1047 ntBASIC28.03■■■□□ 2.08
RPGRQ92834 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC28.03■■■□□ 2.08
RPGRQ92834 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC28.03■■■□□ 2.08
RPGRQ92834 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.03■■■□□ 2.08
RPGRQ92834 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RPGRQ92834 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RPGRQ92834 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RPGRQ92834 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC28.02■■■□□ 2.08
RPGRQ92834 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
RPGRQ92834 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
RPGRQ92834 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
RPGRQ92834 MIR6084-201ENST00000622012 110 ntBASIC28.02■■■□□ 2.08
RPGRQ92834 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC28.02■■■□□ 2.08
RPGRQ92834 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RPGRQ92834 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.02■■■□□ 2.08
RPGRQ92834 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.08
RPGRQ92834 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.01■■■□□ 2.07
RPGRQ92834 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RPGRQ92834 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
RPGRQ92834 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
RPGRQ92834 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms