Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SCFD1Q8WVM8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
SCFD1Q8WVM8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.92■■□□□ 1.58
SCFD1Q8WVM8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SCFD1Q8WVM8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
SCFD1Q8WVM8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SCFD1Q8WVM8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SCFD1Q8WVM8 TSPY9P-201ENST00000440215 945 ntBASIC24.91■■□□□ 1.58
SCFD1Q8WVM8 TSPY11P-201ENST00000442607 1045 ntBASIC24.91■■□□□ 1.58
SCFD1Q8WVM8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.91■■□□□ 1.58
SCFD1Q8WVM8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SCFD1Q8WVM8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
SCFD1Q8WVM8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.91■■□□□ 1.58
SCFD1Q8WVM8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.9■■□□□ 1.58
SCFD1Q8WVM8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
SCFD1Q8WVM8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCFD1Q8WVM8 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.9■■□□□ 1.58
SCFD1Q8WVM8 UNC93B8-201ENST00000511903 705 ntBASIC24.9■■□□□ 1.58
SCFD1Q8WVM8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
SCFD1Q8WVM8 MTDHP2-201ENST00000601468 714 ntBASIC24.9■■□□□ 1.58
SCFD1Q8WVM8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.9■■□□□ 1.58
SCFD1Q8WVM8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.9■■□□□ 1.58
SCFD1Q8WVM8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.9■■□□□ 1.58
SCFD1Q8WVM8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCFD1Q8WVM8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.89■■□□□ 1.58
SCFD1Q8WVM8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SCFD1Q8WVM8 AC005703.6-201ENST00000623265 1329 ntBASIC24.89■■□□□ 1.58
SCFD1Q8WVM8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SCFD1Q8WVM8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
SCFD1Q8WVM8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SCFD1Q8WVM8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SCFD1Q8WVM8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SCFD1Q8WVM8 AC010997.5-201ENST00000609182 354 ntBASIC24.89■■□□□ 1.58
SCFD1Q8WVM8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
SCFD1Q8WVM8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
SCFD1Q8WVM8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.89■■□□□ 1.57
SCFD1Q8WVM8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SCFD1Q8WVM8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SCFD1Q8WVM8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.88■■□□□ 1.57
SCFD1Q8WVM8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.88■■□□□ 1.57
SCFD1Q8WVM8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SCFD1Q8WVM8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SCFD1Q8WVM8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.88■■□□□ 1.57
SCFD1Q8WVM8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SCFD1Q8WVM8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.88■■□□□ 1.57
SCFD1Q8WVM8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SCFD1Q8WVM8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SCFD1Q8WVM8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.87■■□□□ 1.57
SCFD1Q8WVM8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.87■■□□□ 1.57
SCFD1Q8WVM8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
SCFD1Q8WVM8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SCFD1Q8WVM8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SCFD1Q8WVM8 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.87■■□□□ 1.57
SCFD1Q8WVM8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.87■■□□□ 1.57
SCFD1Q8WVM8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.87■■□□□ 1.57
SCFD1Q8WVM8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SCFD1Q8WVM8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SCFD1Q8WVM8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SCFD1Q8WVM8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SCFD1Q8WVM8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
SCFD1Q8WVM8 GUSBP5-201ENST00000418136 578 ntBASIC24.86■■□□□ 1.57
SCFD1Q8WVM8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.86■■□□□ 1.57
SCFD1Q8WVM8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SCFD1Q8WVM8 AC079630.1-202ENST00000618127 1840 ntBASIC24.86■■□□□ 1.57
SCFD1Q8WVM8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.86■■□□□ 1.57
SCFD1Q8WVM8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SCFD1Q8WVM8 DUSP8P3-201ENST00000399571 1760 ntBASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 C9orf163-202ENST00000624034 2573 ntBASIC24.85■■□□□ 1.57
SCFD1Q8WVM8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCFD1Q8WVM8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCFD1Q8WVM8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
SCFD1Q8WVM8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCFD1Q8WVM8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCFD1Q8WVM8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCFD1Q8WVM8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCFD1Q8WVM8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCFD1Q8WVM8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
SCFD1Q8WVM8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCFD1Q8WVM8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
SCFD1Q8WVM8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.83■■□□□ 1.57
SCFD1Q8WVM8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.83■■□□□ 1.57
SCFD1Q8WVM8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.83■■□□□ 1.57
SCFD1Q8WVM8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCFD1Q8WVM8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.82■■□□□ 1.56
SCFD1Q8WVM8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SCFD1Q8WVM8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.82■■□□□ 1.56
SCFD1Q8WVM8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCFD1Q8WVM8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SCFD1Q8WVM8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms