Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMIM4Q8WVI0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 AC139530.1-201ENST00000575312 1977 ntBASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 SMPD5-203ENST00000639008 1464 ntBASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 PKD1P6-201ENST00000343738 4769 ntBASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMIM4Q8WVI0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.31■□□□□ 0.68
SMIM4Q8WVI0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMIM4Q8WVI0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMIM4Q8WVI0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.31■□□□□ 0.68
SMIM4Q8WVI0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.31■□□□□ 0.68
SMIM4Q8WVI0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMIM4Q8WVI0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMIM4Q8WVI0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMIM4Q8WVI0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMIM4Q8WVI0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM4Q8WVI0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM4Q8WVI0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.28■□□□□ 0.68
SMIM4Q8WVI0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM4Q8WVI0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM4Q8WVI0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SMIM4Q8WVI0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.28■□□□□ 0.68
SMIM4Q8WVI0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM4Q8WVI0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.28■□□□□ 0.68
SMIM4Q8WVI0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM4Q8WVI0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.27■□□□□ 0.68
SMIM4Q8WVI0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM4Q8WVI0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM4Q8WVI0 FBXW4P1-201ENST00000426721 2239 ntBASIC19.27■□□□□ 0.68
SMIM4Q8WVI0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM4Q8WVI0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.27■□□□□ 0.68
SMIM4Q8WVI0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.27■□□□□ 0.68
SMIM4Q8WVI0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM4Q8WVI0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMIM4Q8WVI0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMIM4Q8WVI0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMIM4Q8WVI0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SMIM4Q8WVI0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SMIM4Q8WVI0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SMIM4Q8WVI0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM4Q8WVI0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM4Q8WVI0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM4Q8WVI0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM4Q8WVI0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM4Q8WVI0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM4Q8WVI0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMIM4Q8WVI0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM4Q8WVI0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.25■□□□□ 0.67
SMIM4Q8WVI0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM4Q8WVI0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM4Q8WVI0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms