Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPEB3Q8NE35 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.73■□□□□ 0.75
CPEB3Q8NE35 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CPEB3Q8NE35 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPEB3Q8NE35 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.73■□□□□ 0.75
CPEB3Q8NE35 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPEB3Q8NE35 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CPEB3Q8NE35 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.72■□□□□ 0.75
CPEB3Q8NE35 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CPEB3Q8NE35 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPEB3Q8NE35 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CPEB3Q8NE35 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.72■□□□□ 0.75
CPEB3Q8NE35 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPEB3Q8NE35 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CPEB3Q8NE35 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CPEB3Q8NE35 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPEB3Q8NE35 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPEB3Q8NE35 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CPEB3Q8NE35 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CPEB3Q8NE35 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPEB3Q8NE35 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CPEB3Q8NE35 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.71■□□□□ 0.75
CPEB3Q8NE35 MIR6724-1-201ENST00000616420 92 ntBASIC19.71■□□□□ 0.75
CPEB3Q8NE35 MIR6724-2-201ENST00000616483 92 ntBASIC19.71■□□□□ 0.75
CPEB3Q8NE35 MIR6724-4-201ENST00000617390 92 ntBASIC19.71■□□□□ 0.75
CPEB3Q8NE35 MIR6724-3-201ENST00000622482 92 ntBASIC19.71■□□□□ 0.75
CPEB3Q8NE35 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CPEB3Q8NE35 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPEB3Q8NE35 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPEB3Q8NE35 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPEB3Q8NE35 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.71■□□□□ 0.75
CPEB3Q8NE35 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.7■□□□□ 0.74
CPEB3Q8NE35 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CPEB3Q8NE35 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 AL356441.2-201ENST00000443009 864 ntBASIC19.69■□□□□ 0.74
CPEB3Q8NE35 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CPEB3Q8NE35 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CPEB3Q8NE35 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CPEB3Q8NE35 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPEB3Q8NE35 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPEB3Q8NE35 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CPEB3Q8NE35 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPEB3Q8NE35 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.68■□□□□ 0.74
CPEB3Q8NE35 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.67■□□□□ 0.74
CPEB3Q8NE35 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CPEB3Q8NE35 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPEB3Q8NE35 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPEB3Q8NE35 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPEB3Q8NE35 ANOS2P-203ENST00000472227 1816 ntBASIC19.66■□□□□ 0.74
CPEB3Q8NE35 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CPEB3Q8NE35 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPEB3Q8NE35 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPEB3Q8NE35 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPEB3Q8NE35 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPEB3Q8NE35 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CPEB3Q8NE35 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.65■□□□□ 0.74
CPEB3Q8NE35 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.65■□□□□ 0.74
CPEB3Q8NE35 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.65■□□□□ 0.74
CPEB3Q8NE35 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPEB3Q8NE35 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.65■□□□□ 0.74
CPEB3Q8NE35 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPEB3Q8NE35 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPEB3Q8NE35 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPEB3Q8NE35 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms