Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 AC241377.3-202ENST00000626088 1088 ntBASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 AC241585.3-202ENST00000628937 1088 ntBASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 AC245100.8-202ENST00000629247 1058 ntBASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNEP1R1Q8N9A8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNEP1R1Q8N9A8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNEP1R1Q8N9A8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.04■□□□□ 0.8
CNEP1R1Q8N9A8 MIR935-201ENST00000401179 91 ntBASIC20.04■□□□□ 0.8
CNEP1R1Q8N9A8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNEP1R1Q8N9A8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNEP1R1Q8N9A8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNEP1R1Q8N9A8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 SERBP1P1-201ENST00000396021 1160 ntBASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 AC009086.3-201ENST00000623486 1008 ntBASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 LINC01124-201ENST00000409786 2117 ntBASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.03■□□□□ 0.8
CNEP1R1Q8N9A8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CNEP1R1Q8N9A8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CNEP1R1Q8N9A8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNEP1R1Q8N9A8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNEP1R1Q8N9A8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNEP1R1Q8N9A8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNEP1R1Q8N9A8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNEP1R1Q8N9A8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNEP1R1Q8N9A8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CNEP1R1Q8N9A8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNEP1R1Q8N9A8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNEP1R1Q8N9A8 EDA-201ENST00000338901 1233 ntBASIC20.01■□□□□ 0.79
CNEP1R1Q8N9A8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.01■□□□□ 0.79
CNEP1R1Q8N9A8 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.01■□□□□ 0.79
CNEP1R1Q8N9A8 AL355001.2-201ENST00000620617 1191 ntBASIC20.01■□□□□ 0.79
CNEP1R1Q8N9A8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNEP1R1Q8N9A8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNEP1R1Q8N9A8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNEP1R1Q8N9A8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNEP1R1Q8N9A8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNEP1R1Q8N9A8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CNEP1R1Q8N9A8 AC006455.2-201ENST00000429931 906 ntBASIC20■□□□□ 0.79
CNEP1R1Q8N9A8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20■□□□□ 0.79
CNEP1R1Q8N9A8 MIR4767-201ENST00000582827 78 ntBASIC20■□□□□ 0.79
CNEP1R1Q8N9A8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20■□□□□ 0.79
CNEP1R1Q8N9A8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20■□□□□ 0.79
CNEP1R1Q8N9A8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNEP1R1Q8N9A8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20■□□□□ 0.79
CNEP1R1Q8N9A8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNEP1R1Q8N9A8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CNEP1R1Q8N9A8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.99■□□□□ 0.79
CNEP1R1Q8N9A8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNEP1R1Q8N9A8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNEP1R1Q8N9A8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CNEP1R1Q8N9A8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNEP1R1Q8N9A8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNEP1R1Q8N9A8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNEP1R1Q8N9A8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNEP1R1Q8N9A8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNEP1R1Q8N9A8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.98■□□□□ 0.79
CNEP1R1Q8N9A8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNEP1R1Q8N9A8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.98■□□□□ 0.79
CNEP1R1Q8N9A8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNEP1R1Q8N9A8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CNEP1R1Q8N9A8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 AL138724.1-201ENST00000606771 1088 ntBASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 AL031432.3-201ENST00000607698 485 ntBASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CNEP1R1Q8N9A8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CNEP1R1Q8N9A8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms