Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SIX5Q8N196 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SIX5Q8N196 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SIX5Q8N196 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.21■■□□□ 1.31
SIX5Q8N196 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.21■■□□□ 1.31
SIX5Q8N196 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SIX5Q8N196 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.21■■□□□ 1.31
SIX5Q8N196 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SIX5Q8N196 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SIX5Q8N196 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SIX5Q8N196 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.2■■□□□ 1.3
SIX5Q8N196 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.2■■□□□ 1.3
SIX5Q8N196 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SIX5Q8N196 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.19■■□□□ 1.3
SIX5Q8N196 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SIX5Q8N196 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.19■■□□□ 1.3
SIX5Q8N196 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SIX5Q8N196 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SIX5Q8N196 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SIX5Q8N196 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.19■■□□□ 1.3
SIX5Q8N196 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.19■■□□□ 1.3
SIX5Q8N196 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.19■■□□□ 1.3
SIX5Q8N196 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SIX5Q8N196 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SIX5Q8N196 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.19■■□□□ 1.3
SIX5Q8N196 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.19■■□□□ 1.3
SIX5Q8N196 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SIX5Q8N196 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.18■■□□□ 1.3
SIX5Q8N196 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SIX5Q8N196 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SIX5Q8N196 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SIX5Q8N196 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
SIX5Q8N196 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SIX5Q8N196 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SIX5Q8N196 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SIX5Q8N196 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SIX5Q8N196 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.17■■□□□ 1.3
SIX5Q8N196 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SIX5Q8N196 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
SIX5Q8N196 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.17■■□□□ 1.3
SIX5Q8N196 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SIX5Q8N196 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SIX5Q8N196 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SIX5Q8N196 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.16■■□□□ 1.3
SIX5Q8N196 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SIX5Q8N196 LINC02228-203ENST00000641970 1355 ntBASIC23.16■■□□□ 1.3
SIX5Q8N196 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SIX5Q8N196 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SIX5Q8N196 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.16■■□□□ 1.3
SIX5Q8N196 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.16■■□□□ 1.3
SIX5Q8N196 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.16■■□□□ 1.3
SIX5Q8N196 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.16■■□□□ 1.3
SIX5Q8N196 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SIX5Q8N196 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SIX5Q8N196 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SIX5Q8N196 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SIX5Q8N196 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SIX5Q8N196 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.15■■□□□ 1.3
SIX5Q8N196 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SIX5Q8N196 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SIX5Q8N196 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.15■■□□□ 1.3
SIX5Q8N196 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SIX5Q8N196 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.15■■□□□ 1.3
SIX5Q8N196 TERF1P2-201ENST00000583350 1212 ntBASIC23.15■■□□□ 1.3
SIX5Q8N196 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SIX5Q8N196 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SIX5Q8N196 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.15■■□□□ 1.3
SIX5Q8N196 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SIX5Q8N196 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIX5Q8N196 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.14■■□□□ 1.29
SIX5Q8N196 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIX5Q8N196 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.14■■□□□ 1.29
SIX5Q8N196 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIX5Q8N196 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.14■■□□□ 1.29
SIX5Q8N196 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SIX5Q8N196 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.13■■□□□ 1.29
SIX5Q8N196 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
SIX5Q8N196 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SIX5Q8N196 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.13■■□□□ 1.29
SIX5Q8N196 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.13■■□□□ 1.29
SIX5Q8N196 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX5Q8N196 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SIX5Q8N196 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIX5Q8N196 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SIX5Q8N196 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SIX5Q8N196 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.12■■□□□ 1.29
SIX5Q8N196 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.12■■□□□ 1.29
SIX5Q8N196 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SIX5Q8N196 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.12■■□□□ 1.29
SIX5Q8N196 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SIX5Q8N196 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SIX5Q8N196 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.12■■□□□ 1.29
SIX5Q8N196 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
SIX5Q8N196 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SIX5Q8N196 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX5Q8N196 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SIX5Q8N196 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SIX5Q8N196 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SIX5Q8N196 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SIX5Q8N196 AC080038.1-201ENST00000611274 1154 ntBASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms