Protein–RNA interactions for Protein: Q8N0V4

LGI2, Leucine-rich repeat LGI family member 2, humanhuman

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI2Q8N0V4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LGI2Q8N0V4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LGI2Q8N0V4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LGI2Q8N0V4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.3■■□□□ 1.32
LGI2Q8N0V4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LGI2Q8N0V4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LGI2Q8N0V4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
LGI2Q8N0V4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.29■■□□□ 1.32
LGI2Q8N0V4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LGI2Q8N0V4 C17orf82-201ENST00000623772 1530 ntBASIC23.29■■□□□ 1.32
LGI2Q8N0V4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LGI2Q8N0V4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.29■■□□□ 1.32
LGI2Q8N0V4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.29■■□□□ 1.32
LGI2Q8N0V4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
LGI2Q8N0V4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LGI2Q8N0V4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LGI2Q8N0V4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LGI2Q8N0V4 AC096631.2-201ENST00000436136 790 ntBASIC23.28■■□□□ 1.32
LGI2Q8N0V4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
LGI2Q8N0V4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
LGI2Q8N0V4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
LGI2Q8N0V4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LGI2Q8N0V4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LGI2Q8N0V4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.27■■□□□ 1.31
LGI2Q8N0V4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LGI2Q8N0V4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LGI2Q8N0V4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.26■■□□□ 1.31
LGI2Q8N0V4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.26■■□□□ 1.31
LGI2Q8N0V4 AC099791.2-201ENST00000605725 427 ntBASIC23.26■■□□□ 1.31
LGI2Q8N0V4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
LGI2Q8N0V4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LGI2Q8N0V4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
LGI2Q8N0V4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LGI2Q8N0V4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LGI2Q8N0V4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LGI2Q8N0V4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
LGI2Q8N0V4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
LGI2Q8N0V4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LGI2Q8N0V4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
LGI2Q8N0V4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
LGI2Q8N0V4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.24■■□□□ 1.31
LGI2Q8N0V4 AC110285.6-201ENST00000617652 491 ntBASIC23.24■■□□□ 1.31
LGI2Q8N0V4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LGI2Q8N0V4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
LGI2Q8N0V4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.24■■□□□ 1.31
LGI2Q8N0V4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
LGI2Q8N0V4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.23■■□□□ 1.31
LGI2Q8N0V4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LGI2Q8N0V4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
LGI2Q8N0V4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LGI2Q8N0V4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LGI2Q8N0V4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.23■■□□□ 1.31
LGI2Q8N0V4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
LGI2Q8N0V4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.23■■□□□ 1.31
LGI2Q8N0V4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LGI2Q8N0V4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LGI2Q8N0V4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LGI2Q8N0V4 AL139246.5-201ENST00000606645 996 ntBASIC23.22■■□□□ 1.31
LGI2Q8N0V4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LGI2Q8N0V4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LGI2Q8N0V4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
LGI2Q8N0V4 UNC93B3-201ENST00000308076 687 ntBASIC23.21■■□□□ 1.31
LGI2Q8N0V4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.21■■□□□ 1.31
LGI2Q8N0V4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LGI2Q8N0V4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LGI2Q8N0V4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LGI2Q8N0V4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LGI2Q8N0V4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LGI2Q8N0V4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
LGI2Q8N0V4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 AC092171.4-201ENST00000609130 632 ntBASIC23.2■■□□□ 1.3
LGI2Q8N0V4 AC241377.3-202ENST00000626088 1088 ntBASIC23.2■■□□□ 1.3
LGI2Q8N0V4 AC241585.3-202ENST00000628937 1088 ntBASIC23.2■■□□□ 1.3
LGI2Q8N0V4 AC245100.8-202ENST00000629247 1058 ntBASIC23.2■■□□□ 1.3
LGI2Q8N0V4 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LGI2Q8N0V4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms