Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CRLF3Q8IUI8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CRLF3Q8IUI8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CRLF3Q8IUI8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CRLF3Q8IUI8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CRLF3Q8IUI8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CRLF3Q8IUI8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CRLF3Q8IUI8 AC010980.1-201ENST00000587192 1142 ntBASIC22.44■■□□□ 1.18
CRLF3Q8IUI8 AL161729.1-201ENST00000604104 1402 ntBASIC22.44■■□□□ 1.18
CRLF3Q8IUI8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.44■■□□□ 1.18
CRLF3Q8IUI8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
CRLF3Q8IUI8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.43■■□□□ 1.18
CRLF3Q8IUI8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.43■■□□□ 1.18
CRLF3Q8IUI8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CRLF3Q8IUI8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CRLF3Q8IUI8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.43■■□□□ 1.18
CRLF3Q8IUI8 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.43■■□□□ 1.18
CRLF3Q8IUI8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CRLF3Q8IUI8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.43■■□□□ 1.18
CRLF3Q8IUI8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
CRLF3Q8IUI8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CRLF3Q8IUI8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CRLF3Q8IUI8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CRLF3Q8IUI8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CRLF3Q8IUI8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
CRLF3Q8IUI8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CRLF3Q8IUI8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CRLF3Q8IUI8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.42■■□□□ 1.18
CRLF3Q8IUI8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.42■■□□□ 1.18
CRLF3Q8IUI8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CRLF3Q8IUI8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 AC127496.7-201ENST00000625110 1798 ntBASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 AC074183.2-201ENST00000623112 922 ntBASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.41■■□□□ 1.18
CRLF3Q8IUI8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CRLF3Q8IUI8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CRLF3Q8IUI8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CRLF3Q8IUI8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CRLF3Q8IUI8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CRLF3Q8IUI8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.39■■□□□ 1.17
CRLF3Q8IUI8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CRLF3Q8IUI8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CRLF3Q8IUI8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.39■■□□□ 1.17
CRLF3Q8IUI8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.39■■□□□ 1.17
CRLF3Q8IUI8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 ECEL1P1-201ENST00000373592 1742 ntBASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.38■■□□□ 1.17
CRLF3Q8IUI8 AC090877.2-201ENST00000558441 1738 ntBASIC22.37■■□□□ 1.17
CRLF3Q8IUI8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CRLF3Q8IUI8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.37■■□□□ 1.17
CRLF3Q8IUI8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CRLF3Q8IUI8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.37■■□□□ 1.17
CRLF3Q8IUI8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CRLF3Q8IUI8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
CRLF3Q8IUI8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.37■■□□□ 1.17
CRLF3Q8IUI8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CRLF3Q8IUI8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CRLF3Q8IUI8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CRLF3Q8IUI8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms