Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC12.08□□□□□ -0.48
LCA10Q71F78 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC12.08□□□□□ -0.48
LCA10Q71F78 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LCA10Q71F78 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LCA10Q71F78 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
LCA10Q71F78 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12.08□□□□□ -0.48
LCA10Q71F78 AC026471.1-201ENST00000564629 3026 ntBASIC12.08□□□□□ -0.48
LCA10Q71F78 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LCA10Q71F78 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC12.07□□□□□ -0.48
LCA10Q71F78 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LCA10Q71F78 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LCA10Q71F78 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LCA10Q71F78 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC12.07□□□□□ -0.48
LCA10Q71F78 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LCA10Q71F78 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC12.07□□□□□ -0.48
LCA10Q71F78 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC12.07□□□□□ -0.48
LCA10Q71F78 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LCA10Q71F78 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LCA10Q71F78 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC12.07□□□□□ -0.48
LCA10Q71F78 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LCA10Q71F78 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LCA10Q71F78 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC12.07□□□□□ -0.48
LCA10Q71F78 AC021231.2-201ENST00000594613 730 ntBASIC12.07□□□□□ -0.48
LCA10Q71F78 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LCA10Q71F78 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LCA10Q71F78 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LCA10Q71F78 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.07□□□□□ -0.48
LCA10Q71F78 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
LCA10Q71F78 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC12.06□□□□□ -0.48
LCA10Q71F78 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
LCA10Q71F78 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 DUX4L29-201ENST00000425409 679 ntBASIC12.06□□□□□ -0.48
LCA10Q71F78 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC12.06□□□□□ -0.48
LCA10Q71F78 RPS2-210ENST00000530225 765 ntTSL 2 BASIC12.06□□□□□ -0.48
LCA10Q71F78 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
LCA10Q71F78 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 AC010501.1-201ENST00000606270 1962 ntBASIC12.06□□□□□ -0.48
LCA10Q71F78 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LCA10Q71F78 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
LCA10Q71F78 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LCA10Q71F78 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LCA10Q71F78 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LCA10Q71F78 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LCA10Q71F78 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LCA10Q71F78 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
LCA10Q71F78 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LCA10Q71F78 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LCA10Q71F78 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC12.05□□□□□ -0.48
LCA10Q71F78 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LCA10Q71F78 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LCA10Q71F78 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LCA10Q71F78 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LCA10Q71F78 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LCA10Q71F78 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
LCA10Q71F78 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LCA10Q71F78 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LCA10Q71F78 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LCA10Q71F78 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
LCA10Q71F78 AC096887.2-201ENST00000623443 1957 ntBASIC12.05□□□□□ -0.48
LCA10Q71F78 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC12.04□□□□□ -0.48
LCA10Q71F78 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LCA10Q71F78 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC12.04□□□□□ -0.48
LCA10Q71F78 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC12.04□□□□□ -0.48
LCA10Q71F78 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LCA10Q71F78 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC12.03□□□□□ -0.48
LCA10Q71F78 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC12.03□□□□□ -0.48
LCA10Q71F78 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC12.03□□□□□ -0.48
LCA10Q71F78 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms