Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
USP31Q70CQ4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.7■■■□□ 2.5
USP31Q70CQ4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
USP31Q70CQ4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
USP31Q70CQ4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
USP31Q70CQ4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
USP31Q70CQ4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
USP31Q70CQ4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC30.68■■■□□ 2.5
USP31Q70CQ4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
USP31Q70CQ4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
USP31Q70CQ4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
USP31Q70CQ4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.67■■■□□ 2.5
USP31Q70CQ4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
USP31Q70CQ4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
USP31Q70CQ4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC30.67■■■□□ 2.5
USP31Q70CQ4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
USP31Q70CQ4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
USP31Q70CQ4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
USP31Q70CQ4 SLC47A1P1-202ENST00000449666 945 ntBASIC30.66■■■□□ 2.5
USP31Q70CQ4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
USP31Q70CQ4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC30.66■■■□□ 2.5
USP31Q70CQ4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
USP31Q70CQ4 GRAMD4P2-201ENST00000423297 1097 ntBASIC30.66■■■□□ 2.5
USP31Q70CQ4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC30.66■■■□□ 2.5
USP31Q70CQ4 AP003733.4-201ENST00000623785 1697 ntBASIC30.65■■■□□ 2.5
USP31Q70CQ4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP31Q70CQ4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP31Q70CQ4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
USP31Q70CQ4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC30.65■■■□□ 2.5
USP31Q70CQ4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
USP31Q70CQ4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC30.64■■■□□ 2.5
USP31Q70CQ4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.64■■■□□ 2.5
USP31Q70CQ4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
USP31Q70CQ4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC30.64■■■□□ 2.5
USP31Q70CQ4 SP2-202ENST00000613139 908 ntTSL 5 BASIC30.64■■■□□ 2.5
USP31Q70CQ4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC30.64■■■□□ 2.49
USP31Q70CQ4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.63■■■□□ 2.49
USP31Q70CQ4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
USP31Q70CQ4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
USP31Q70CQ4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.63■■■□□ 2.49
USP31Q70CQ4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
USP31Q70CQ4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
USP31Q70CQ4 AK1-201ENST00000223836 736 ntTSL 3 BASIC30.62■■■□□ 2.49
USP31Q70CQ4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
USP31Q70CQ4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.62■■■□□ 2.49
USP31Q70CQ4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
USP31Q70CQ4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
USP31Q70CQ4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
USP31Q70CQ4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC30.61■■■□□ 2.49
USP31Q70CQ4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
USP31Q70CQ4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC30.61■■■□□ 2.49
USP31Q70CQ4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.6■■■□□ 2.49
USP31Q70CQ4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
USP31Q70CQ4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC30.6■■■□□ 2.49
USP31Q70CQ4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.6■■■□□ 2.49
USP31Q70CQ4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
USP31Q70CQ4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
USP31Q70CQ4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
USP31Q70CQ4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
USP31Q70CQ4 AL499627.2-201ENST00000606283 725 ntBASIC30.59■■■□□ 2.49
USP31Q70CQ4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.59■■■□□ 2.49
USP31Q70CQ4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC30.59■■■□□ 2.49
USP31Q70CQ4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
USP31Q70CQ4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
USP31Q70CQ4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
USP31Q70CQ4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
USP31Q70CQ4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
USP31Q70CQ4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
USP31Q70CQ4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
USP31Q70CQ4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC30.58■■■□□ 2.49
USP31Q70CQ4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
USP31Q70CQ4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
USP31Q70CQ4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
USP31Q70CQ4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
USP31Q70CQ4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
USP31Q70CQ4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
USP31Q70CQ4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
USP31Q70CQ4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
USP31Q70CQ4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
USP31Q70CQ4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC30.56■■■□□ 2.48
USP31Q70CQ4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
USP31Q70CQ4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
USP31Q70CQ4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.56■■■□□ 2.48
USP31Q70CQ4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC30.55■■■□□ 2.48
USP31Q70CQ4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC30.55■■■□□ 2.48
USP31Q70CQ4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC30.55■■■□□ 2.48
USP31Q70CQ4 AC126544.1-201ENST00000580842 1059 ntBASIC30.55■■■□□ 2.48
USP31Q70CQ4 AL031602.1-201ENST00000633169 911 ntBASIC30.55■■■□□ 2.48
USP31Q70CQ4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
USP31Q70CQ4 TSPY26P-201ENST00000476365 1326 ntBASIC30.55■■■□□ 2.48
USP31Q70CQ4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
USP31Q70CQ4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
USP31Q70CQ4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
USP31Q70CQ4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
USP31Q70CQ4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC30.54■■■□□ 2.48
USP31Q70CQ4 IGHV3-19-201ENST00000521488 291 ntBASIC30.54■■■□□ 2.48
USP31Q70CQ4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC30.54■■■□□ 2.48
USP31Q70CQ4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
USP31Q70CQ4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
USP31Q70CQ4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms