Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL13A1Q5TAT6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC26.15■■□□□ 1.78
COL13A1Q5TAT6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL13A1Q5TAT6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.15■■□□□ 1.78
COL13A1Q5TAT6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.14■■□□□ 1.78
COL13A1Q5TAT6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL13A1Q5TAT6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL13A1Q5TAT6 SLC7A5P1-201ENST00000568957 537 ntBASIC26.14■■□□□ 1.78
COL13A1Q5TAT6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
COL13A1Q5TAT6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL13A1Q5TAT6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL13A1Q5TAT6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL13A1Q5TAT6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.13■■□□□ 1.77
COL13A1Q5TAT6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL13A1Q5TAT6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
COL13A1Q5TAT6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL13A1Q5TAT6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.13■■□□□ 1.77
COL13A1Q5TAT6 AC142381.4-202ENST00000563973 229 ntBASIC26.13■■□□□ 1.77
COL13A1Q5TAT6 DUX4L4-201ENST00000566884 1269 ntBASIC26.13■■□□□ 1.77
COL13A1Q5TAT6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL13A1Q5TAT6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
COL13A1Q5TAT6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 KRT18P11-201ENST00000435214 1283 ntBASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 AC131274.2-201ENST00000580697 1507 ntBASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL13A1Q5TAT6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 pRNA.6-201ENST00000610482 90 ntBASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 pRNA.5-201ENST00000612139 90 ntBASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 pRNA.11-201ENST00000618423 90 ntBASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 pRNA.13-201ENST00000619112 90 ntBASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL13A1Q5TAT6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.1■■□□□ 1.77
COL13A1Q5TAT6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.1■■□□□ 1.77
COL13A1Q5TAT6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL13A1Q5TAT6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL13A1Q5TAT6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.09■■□□□ 1.77
COL13A1Q5TAT6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL13A1Q5TAT6 KRT19P1-201ENST00000405746 1186 ntBASIC26.09■■□□□ 1.77
COL13A1Q5TAT6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL13A1Q5TAT6 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.09■■□□□ 1.77
COL13A1Q5TAT6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL13A1Q5TAT6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.09■■□□□ 1.77
COL13A1Q5TAT6 FOXO3B-201ENST00000395675 1928 ntBASIC26.09■■□□□ 1.77
COL13A1Q5TAT6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL13A1Q5TAT6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
COL13A1Q5TAT6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.09■■□□□ 1.77
COL13A1Q5TAT6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.08■■□□□ 1.77
COL13A1Q5TAT6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
COL13A1Q5TAT6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL13A1Q5TAT6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.08■■□□□ 1.77
COL13A1Q5TAT6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
COL13A1Q5TAT6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL13A1Q5TAT6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL13A1Q5TAT6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL13A1Q5TAT6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.07■■□□□ 1.76
COL13A1Q5TAT6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.07■■□□□ 1.76
COL13A1Q5TAT6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
COL13A1Q5TAT6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
COL13A1Q5TAT6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COL13A1Q5TAT6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL13A1Q5TAT6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL13A1Q5TAT6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.06■■□□□ 1.76
COL13A1Q5TAT6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC26.06■■□□□ 1.76
COL13A1Q5TAT6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.06■■□□□ 1.76
COL13A1Q5TAT6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL13A1Q5TAT6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.05■■□□□ 1.76
COL13A1Q5TAT6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL13A1Q5TAT6 AC091060.1-201ENST00000623524 1766 ntBASIC26.05■■□□□ 1.76
COL13A1Q5TAT6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC26.05■■□□□ 1.76
COL13A1Q5TAT6 UNC93B4-201ENST00000505679 747 ntBASIC26.05■■□□□ 1.76
COL13A1Q5TAT6 AC005181.1-201ENST00000604782 1256 ntBASIC26.05■■□□□ 1.76
COL13A1Q5TAT6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL13A1Q5TAT6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.05■■□□□ 1.76
COL13A1Q5TAT6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
COL13A1Q5TAT6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
COL13A1Q5TAT6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.04■■□□□ 1.76
COL13A1Q5TAT6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL13A1Q5TAT6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
COL13A1Q5TAT6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.04■■□□□ 1.76
COL13A1Q5TAT6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms