Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.56■■□□□ 1.04
SPIN4Q56A73 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.56■■□□□ 1.04
SPIN4Q56A73 BX664725.1-201ENST00000438252 379 ntBASIC21.56■■□□□ 1.04
SPIN4Q56A73 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.56■■□□□ 1.04
SPIN4Q56A73 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.56■■□□□ 1.04
SPIN4Q56A73 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.56■■□□□ 1.04
SPIN4Q56A73 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPIN4Q56A73 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPIN4Q56A73 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPIN4Q56A73 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPIN4Q56A73 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPIN4Q56A73 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
SPIN4Q56A73 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SPIN4Q56A73 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPIN4Q56A73 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SPIN4Q56A73 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPIN4Q56A73 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.55■■□□□ 1.04
SPIN4Q56A73 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
SPIN4Q56A73 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.55■■□□□ 1.04
SPIN4Q56A73 AC021242.3-201ENST00000607598 1377 ntBASIC21.55■■□□□ 1.04
SPIN4Q56A73 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPIN4Q56A73 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPIN4Q56A73 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
SPIN4Q56A73 C9orf163-202ENST00000624034 2573 ntBASIC21.55■■□□□ 1.04
SPIN4Q56A73 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPIN4Q56A73 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.55■■□□□ 1.04
SPIN4Q56A73 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.55■■□□□ 1.04
SPIN4Q56A73 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPIN4Q56A73 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPIN4Q56A73 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.54■■□□□ 1.04
SPIN4Q56A73 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.54■■□□□ 1.04
SPIN4Q56A73 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
SPIN4Q56A73 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPIN4Q56A73 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.54■■□□□ 1.04
SPIN4Q56A73 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPIN4Q56A73 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPIN4Q56A73 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
SPIN4Q56A73 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
SPIN4Q56A73 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.54■■□□□ 1.04
SPIN4Q56A73 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.53■■□□□ 1.04
SPIN4Q56A73 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPIN4Q56A73 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SPIN4Q56A73 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SPIN4Q56A73 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
SPIN4Q56A73 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPIN4Q56A73 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SPIN4Q56A73 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPIN4Q56A73 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SPIN4Q56A73 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.52■■□□□ 1.04
SPIN4Q56A73 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.52■■□□□ 1.04
SPIN4Q56A73 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPIN4Q56A73 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.52■■□□□ 1.04
SPIN4Q56A73 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPIN4Q56A73 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPIN4Q56A73 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.52■■□□□ 1.04
SPIN4Q56A73 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPIN4Q56A73 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPIN4Q56A73 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.52■■□□□ 1.04
SPIN4Q56A73 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SPIN4Q56A73 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SPIN4Q56A73 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SPIN4Q56A73 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SPIN4Q56A73 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.52■■□□□ 1.03
SPIN4Q56A73 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SPIN4Q56A73 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SPIN4Q56A73 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPIN4Q56A73 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPIN4Q56A73 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPIN4Q56A73 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SPIN4Q56A73 AC079630.1-202ENST00000618127 1840 ntBASIC21.51■■□□□ 1.03
SPIN4Q56A73 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPIN4Q56A73 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.51■■□□□ 1.03
SPIN4Q56A73 MIR6722-201ENST00000617286 78 ntBASIC21.51■■□□□ 1.03
SPIN4Q56A73 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.51■■□□□ 1.03
SPIN4Q56A73 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPIN4Q56A73 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SPIN4Q56A73 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPIN4Q56A73 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SPIN4Q56A73 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPIN4Q56A73 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPIN4Q56A73 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPIN4Q56A73 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.5■■□□□ 1.03
SPIN4Q56A73 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SPIN4Q56A73 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SPIN4Q56A73 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.5■■□□□ 1.03
SPIN4Q56A73 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.5■■□□□ 1.03
SPIN4Q56A73 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPIN4Q56A73 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SPIN4Q56A73 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SPIN4Q56A73 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPIN4Q56A73 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SPIN4Q56A73 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
SPIN4Q56A73 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPIN4Q56A73 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPIN4Q56A73 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPIN4Q56A73 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPIN4Q56A73 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPIN4Q56A73 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPIN4Q56A73 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.49■■□□□ 1.03
SPIN4Q56A73 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms