Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.09■■□□□ 1.61
TRIM60Q495X7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.09■■□□□ 1.61
TRIM60Q495X7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TRIM60Q495X7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.08■■□□□ 1.61
TRIM60Q495X7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM60Q495X7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM60Q495X7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.08■■□□□ 1.61
TRIM60Q495X7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.08■■□□□ 1.61
TRIM60Q495X7 TERF1P2-201ENST00000583350 1212 ntBASIC25.08■■□□□ 1.61
TRIM60Q495X7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TRIM60Q495X7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
TRIM60Q495X7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.6
TRIM60Q495X7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.08■■□□□ 1.6
TRIM60Q495X7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.08■■□□□ 1.6
TRIM60Q495X7 SLC6A10P-202ENST00000431994 2058 ntBASIC25.08■■□□□ 1.6
TRIM60Q495X7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM60Q495X7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM60Q495X7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRIM60Q495X7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM60Q495X7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM60Q495X7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
TRIM60Q495X7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.06■■□□□ 1.6
TRIM60Q495X7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM60Q495X7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.05■■□□□ 1.6
TRIM60Q495X7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM60Q495X7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.05■■□□□ 1.6
TRIM60Q495X7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.05■■□□□ 1.6
TRIM60Q495X7 MIR6089-201ENST00000616698 64 ntBASIC25.05■■□□□ 1.6
TRIM60Q495X7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM60Q495X7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM60Q495X7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM60Q495X7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
TRIM60Q495X7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.05■■□□□ 1.6
TRIM60Q495X7 LINC02228-203ENST00000641970 1355 ntBASIC25.05■■□□□ 1.6
TRIM60Q495X7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.04■■□□□ 1.6
TRIM60Q495X7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM60Q495X7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM60Q495X7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
TRIM60Q495X7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.04■■□□□ 1.6
TRIM60Q495X7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.04■■□□□ 1.6
TRIM60Q495X7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM60Q495X7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.04■■□□□ 1.6
TRIM60Q495X7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.04■■□□□ 1.6
TRIM60Q495X7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM60Q495X7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.03■■□□□ 1.6
TRIM60Q495X7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.03■■□□□ 1.6
TRIM60Q495X7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM60Q495X7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.03■■□□□ 1.6
TRIM60Q495X7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM60Q495X7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.03■■□□□ 1.6
TRIM60Q495X7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
TRIM60Q495X7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM60Q495X7 AC141586.4-201ENST00000624558 1573 ntBASIC25.02■■□□□ 1.6
TRIM60Q495X7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM60Q495X7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.02■■□□□ 1.6
TRIM60Q495X7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.02■■□□□ 1.6
TRIM60Q495X7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
TRIM60Q495X7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
TRIM60Q495X7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.02■■□□□ 1.6
TRIM60Q495X7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM60Q495X7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM60Q495X7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM60Q495X7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM60Q495X7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM60Q495X7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
TRIM60Q495X7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
TRIM60Q495X7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
TRIM60Q495X7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM60Q495X7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
TRIM60Q495X7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
TRIM60Q495X7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25■■□□□ 1.59
TRIM60Q495X7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRIM60Q495X7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRIM60Q495X7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
TRIM60Q495X7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
TRIM60Q495X7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
TRIM60Q495X7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
TRIM60Q495X7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRIM60Q495X7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM60Q495X7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM60Q495X7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM60Q495X7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM60Q495X7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
TRIM60Q495X7 AC080038.1-201ENST00000611274 1154 ntBASIC24.99■■□□□ 1.59
TRIM60Q495X7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM60Q495X7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.98■■□□□ 1.59
TRIM60Q495X7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM60Q495X7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.98■■□□□ 1.59
TRIM60Q495X7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM60Q495X7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM60Q495X7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM60Q495X7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
TRIM60Q495X7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM60Q495X7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM60Q495X7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
TRIM60Q495X7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
TRIM60Q495X7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.97■■□□□ 1.59
TRIM60Q495X7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
TRIM60Q495X7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM60Q495X7 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms