Protein–RNA interactions for Protein: Q38SD2

LRRK1, Leucine-rich repeat serine/threonine-protein kinase 1, humanhuman

Predictions only

Length 2,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1Q38SD2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRK1Q38SD2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
LRRK1Q38SD2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LRRK1Q38SD2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.49■■□□□ 1.19
LRRK1Q38SD2 AC079630.1-202ENST00000618127 1840 ntBASIC22.49■■□□□ 1.19
LRRK1Q38SD2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.49■■□□□ 1.19
LRRK1Q38SD2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRK1Q38SD2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.48■■□□□ 1.19
LRRK1Q38SD2 SERBP1P1-201ENST00000396021 1160 ntBASIC22.48■■□□□ 1.19
LRRK1Q38SD2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.48■■□□□ 1.19
LRRK1Q38SD2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRK1Q38SD2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRK1Q38SD2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRK1Q38SD2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRK1Q38SD2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.48■■□□□ 1.19
LRRK1Q38SD2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.48■■□□□ 1.19
LRRK1Q38SD2 AC135279.3-201ENST00000610945 1311 ntBASIC22.48■■□□□ 1.19
LRRK1Q38SD2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
LRRK1Q38SD2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRK1Q38SD2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRK1Q38SD2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.47■■□□□ 1.19
LRRK1Q38SD2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.47■■□□□ 1.19
LRRK1Q38SD2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRK1Q38SD2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRK1Q38SD2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.47■■□□□ 1.19
LRRK1Q38SD2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LRRK1Q38SD2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRK1Q38SD2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRK1Q38SD2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
LRRK1Q38SD2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.45■■□□□ 1.19
LRRK1Q38SD2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 AC011298.3-201ENST00000615796 283 ntBASIC22.45■■□□□ 1.18
LRRK1Q38SD2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.45■■□□□ 1.18
LRRK1Q38SD2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRRK1Q38SD2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.44■■□□□ 1.18
LRRK1Q38SD2 AC241377.3-202ENST00000626088 1088 ntBASIC22.44■■□□□ 1.18
LRRK1Q38SD2 AC241585.3-202ENST00000628937 1088 ntBASIC22.44■■□□□ 1.18
LRRK1Q38SD2 AC245100.8-202ENST00000629247 1058 ntBASIC22.44■■□□□ 1.18
LRRK1Q38SD2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRK1Q38SD2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRK1Q38SD2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 SRD5A1P1-201ENST00000442297 786 ntBASIC22.43■■□□□ 1.18
LRRK1Q38SD2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 PBX2P1-201ENST00000493219 1291 ntBASIC22.43■■□□□ 1.18
LRRK1Q38SD2 AC133561.4-201ENST00000566112 224 ntBASIC22.43■■□□□ 1.18
LRRK1Q38SD2 AL136162.1-201ENST00000607711 1078 ntBASIC22.43■■□□□ 1.18
LRRK1Q38SD2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.43■■□□□ 1.18
LRRK1Q38SD2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRK1Q38SD2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRK1Q38SD2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRK1Q38SD2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.42■■□□□ 1.18
LRRK1Q38SD2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRK1Q38SD2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.42■■□□□ 1.18
LRRK1Q38SD2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRK1Q38SD2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
LRRK1Q38SD2 AP001330.3-201ENST00000520123 633 ntBASIC22.41■■□□□ 1.18
LRRK1Q38SD2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LRRK1Q38SD2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.41■■□□□ 1.18
LRRK1Q38SD2 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.41■■□□□ 1.18
LRRK1Q38SD2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRK1Q38SD2 SLC47A1P1-202ENST00000449666 945 ntBASIC22.41■■□□□ 1.18
LRRK1Q38SD2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRK1Q38SD2 SYT6-210ENST00000641643 1587 ntBASIC22.41■■□□□ 1.18
LRRK1Q38SD2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRK1Q38SD2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.41■■□□□ 1.18
LRRK1Q38SD2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.41■■□□□ 1.18
LRRK1Q38SD2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.4■■□□□ 1.18
LRRK1Q38SD2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.4■■□□□ 1.18
LRRK1Q38SD2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
LRRK1Q38SD2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.4■■□□□ 1.18
LRRK1Q38SD2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.4■■□□□ 1.18
LRRK1Q38SD2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.4■■□□□ 1.18
LRRK1Q38SD2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.4■■□□□ 1.18
LRRK1Q38SD2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRK1Q38SD2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.4■■□□□ 1.18
LRRK1Q38SD2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
LRRK1Q38SD2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRK1Q38SD2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms