Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ERCC6LQ2NKX8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
ERCC6LQ2NKX8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
ERCC6LQ2NKX8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ERCC6LQ2NKX8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ERCC6LQ2NKX8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ERCC6LQ2NKX8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.89■■□□□ 1.41
ERCC6LQ2NKX8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
ERCC6LQ2NKX8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ERCC6LQ2NKX8 AC139530.1-201ENST00000575312 1977 ntBASIC23.89■■□□□ 1.41
ERCC6LQ2NKX8 AC026310.3-201ENST00000625186 2373 ntBASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 DUX4L13-201ENST00000554103 1267 ntBASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 DUX4L15-201ENST00000611059 1267 ntBASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 DUX4L23-201ENST00000615195 1269 ntBASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 DUX4L24-201ENST00000617576 1269 ntBASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 DUX4L22-201ENST00000618238 1269 ntBASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 DUX4L20-201ENST00000619712 1269 ntBASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 DUX4L21-201ENST00000622058 1269 ntBASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 DUX4L10-201ENST00000622460 1267 ntBASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 DUX4L25-201ENST00000624915 1269 ntBASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.88■■□□□ 1.41
ERCC6LQ2NKX8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ERCC6LQ2NKX8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ERCC6LQ2NKX8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.87■■□□□ 1.41
ERCC6LQ2NKX8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.87■■□□□ 1.41
ERCC6LQ2NKX8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
ERCC6LQ2NKX8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
ERCC6LQ2NKX8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ERCC6LQ2NKX8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ERCC6LQ2NKX8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
ERCC6LQ2NKX8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 AC092053.2-201ENST00000640557 1818 ntBASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC6LQ2NKX8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ERCC6LQ2NKX8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.85■■□□□ 1.41
ERCC6LQ2NKX8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
ERCC6LQ2NKX8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.85■■□□□ 1.41
ERCC6LQ2NKX8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ERCC6LQ2NKX8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
ERCC6LQ2NKX8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
ERCC6LQ2NKX8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.85■■□□□ 1.41
ERCC6LQ2NKX8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC6LQ2NKX8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.83■■□□□ 1.41
ERCC6LQ2NKX8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.83■■□□□ 1.41
ERCC6LQ2NKX8 AL121603.2-201ENST00000557373 2117 ntBASIC23.83■■□□□ 1.41
ERCC6LQ2NKX8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
ERCC6LQ2NKX8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
ERCC6LQ2NKX8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.83■■□□□ 1.41
ERCC6LQ2NKX8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ERCC6LQ2NKX8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
ERCC6LQ2NKX8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.83■■□□□ 1.41
ERCC6LQ2NKX8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ERCC6LQ2NKX8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
ERCC6LQ2NKX8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.81■■□□□ 1.4
ERCC6LQ2NKX8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
ERCC6LQ2NKX8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ERCC6LQ2NKX8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ERCC6LQ2NKX8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms