Protein–RNA interactions for Protein: Q12277

RRP42, Exosome complex component RRP42, yeastyeast

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP42Q12277 YLR467C-AYLR467C-A 483 nt4.37□□□□□ -1.71
RRP42Q12277 YML133W-BYML133W-B 483 nt4.37□□□□□ -1.71
RRP42Q12277 NOP13YNL175C 1212 nt4.37□□□□□ -1.71
RRP42Q12277 YNL339W-BYNL339W-B 483 nt4.37□□□□□ -1.71
RRP42Q12277 YBL113W-AYBL113W-A 483 nt4.37□□□□□ -1.71
RRP42Q12277 YOR396C-AYOR396C-A 483 nt4.37□□□□□ -1.71
RRP42Q12277 ALG5YPL227C 1005 nt4.37□□□□□ -1.71
RRP42Q12277 YPL283W-BYPL283W-B 483 nt4.37□□□□□ -1.71
RRP42Q12277 YPR204C-AYPR204C-A 483 nt4.37□□□□□ -1.71
RRP42Q12277 PEX29YDR479C 1665 nt4.37□□□□□ -1.71
RRP42Q12277 RFT1YBL020W 1725 nt4.37□□□□□ -1.71
RRP42Q12277 GAD1YMR250W 1758 nt4.37□□□□□ -1.71
RRP42Q12277 CNL1YDR357C 369 nt4.36□□□□□ -1.71
RRP42Q12277 SPR6YER115C 576 nt4.36□□□□□ -1.71
RRP42Q12277 HPM1YIL110W 1134 nt4.36□□□□□ -1.71
RRP42Q12277 GAT3YLR013W 426 nt4.36□□□□□ -1.71
RRP42Q12277 TIP41YPR040W 1071 nt4.36□□□□□ -1.71
RRP42Q12277 SMP1YBR182C 1359 nt4.36□□□□□ -1.71
RRP42Q12277 CTT1YGR088W 1689 nt4.35□□□□□ -1.71
RRP42Q12277 MPH2YDL247W 1830 nt4.35□□□□□ -1.71
RRP42Q12277 LAP2YNL045W 2016 nt4.35□□□□□ -1.71
RRP42Q12277 YLR122CYLR122C 378 nt4.35□□□□□ -1.71
RRP42Q12277 RPP0YLR340W 939 nt4.35□□□□□ -1.71
RRP42Q12277 RGS2YOR107W 930 nt4.35□□□□□ -1.71
RRP42Q12277 HFA1YMR207C 6372 nt4.34□□□□□ -1.71
RRP42Q12277 IML2YJL082W 2196 nt4.34□□□□□ -1.71
RRP42Q12277 SNM1YDR478W 597 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)CtK(CUU)C 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)D1tK(CUU)D1 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)D2tK(CUU)D2 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)E1tK(CUU)E1 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)E2tK(CUU)E2 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)FtK(CUU)F 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)G1tK(CUU)G1 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)G2tK(CUU)G2 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)G3tK(CUU)G3 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)ItK(CUU)I 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)JtK(CUU)J 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)KtK(CUU)K 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)MtK(CUU)M 73 nt4.34□□□□□ -1.71
RRP42Q12277 tK(CUU)PtK(CUU)P 73 nt4.34□□□□□ -1.71
RRP42Q12277 CIA2YHR122W 696 nt4.34□□□□□ -1.71
RRP42Q12277 MAD2YJL030W 591 nt4.34□□□□□ -1.71
RRP42Q12277 LSO1YJR005C-A 282 nt4.34□□□□□ -1.71
RRP42Q12277 YAL047W-AYAL047W-A 330 nt4.34□□□□□ -1.71
RRP42Q12277 UBI4YLL039C 1146 nt4.34□□□□□ -1.71
RRP42Q12277 CCS1YMR038C 750 nt4.34□□□□□ -1.71
RRP42Q12277 YMR086C-AYMR086C-A 339 nt4.34□□□□□ -1.71
RRP42Q12277 NAT5YOR253W 531 nt4.34□□□□□ -1.71
RRP42Q12277 ECM23YPL021W 564 nt4.34□□□□□ -1.71
RRP42Q12277 snR3snR3 194 nt4.34□□□□□ -1.71
RRP42Q12277 ARH1YDR376W 1482 nt4.34□□□□□ -1.71
RRP42Q12277 YER158CYER158C 1722 nt4.34□□□□□ -1.71
RRP42Q12277 TIF4632YGL049C 2745 nt4.34□□□□□ -1.72
RRP42Q12277 SAF1YBR280C 1914 nt4.33□□□□□ -1.72
RRP42Q12277 PRP28YDR243C 1767 nt4.33□□□□□ -1.72
RRP42Q12277 NMD3YHR170W 1557 nt4.33□□□□□ -1.72
RRP42Q12277 ALD3YMR169C 1521 nt4.33□□□□□ -1.72
RRP42Q12277 ALD2YMR170C 1521 nt4.33□□□□□ -1.72
RRP42Q12277 UBC6YER100W 753 nt4.33□□□□□ -1.72
RRP42Q12277 YER145C-AYER145C-A 438 nt4.33□□□□□ -1.72
RRP42Q12277 URE2YNL229C 1065 nt4.33□□□□□ -1.72
RRP42Q12277 snR19snR19 568 nt4.33□□□□□ -1.72
RRP42Q12277 THI20YOL055C 1656 nt4.32□□□□□ -1.72
RRP42Q12277 YDL124WYDL124W 939 nt4.32□□□□□ -1.72
RRP42Q12277 RNA15YGL044C 891 nt4.32□□□□□ -1.72
RRP42Q12277 RMR1YGL250W 726 nt4.32□□□□□ -1.72
RRP42Q12277 NAT2YGR147C 867 nt4.32□□□□□ -1.72
RRP42Q12277 YIL165CYIL165C 360 nt4.32□□□□□ -1.72
RRP42Q12277 PCL1YNL289W 840 nt4.32□□□□□ -1.72
RRP42Q12277 OPY2YPR075C 1083 nt4.32□□□□□ -1.72
RRP42Q12277 YCL021W-AYCL021W-A 378 nt4.32□□□□□ -1.72
RRP42Q12277 TPO2YGR138C 1845 nt4.32□□□□□ -1.72
RRP42Q12277 TRM44YPL030W 1704 nt4.32□□□□□ -1.72
RRP42Q12277 SIR2YDL042C 1689 nt4.32□□□□□ -1.72
RRP42Q12277 ERG4YGL012W 1422 nt4.31□□□□□ -1.72
RRP42Q12277 CBP1YJL209W 1965 nt4.31□□□□□ -1.72
RRP42Q12277 STR2YJR130C 1920 nt4.31□□□□□ -1.72
RRP42Q12277 YFR034W-AYFR034W-A 288 nt4.31□□□□□ -1.72
RRP42Q12277 YHR214WYHR214W 612 nt4.31□□□□□ -1.72
RRP42Q12277 GPP1YIL053W 753 nt4.31□□□□□ -1.72
RRP42Q12277 TEF4YKL081W 1239 nt4.31□□□□□ -1.72
RRP42Q12277 YAR066WYAR066W 612 nt4.31□□□□□ -1.72
RRP42Q12277 IXR1YKL032C 1794 nt4.31□□□□□ -1.72
RRP42Q12277 PGM2YMR105C 1710 nt4.31□□□□□ -1.72
RRP42Q12277 YDR132CYDR132C 1488 nt4.3□□□□□ -1.72
RRP42Q12277 PCL6YER059W 1263 nt4.3□□□□□ -1.72
RRP42Q12277 ACT1YFL039C 1128 nt4.3□□□□□ -1.72
RRP42Q12277 YGR011WYGR011W 327 nt4.3□□□□□ -1.72
RRP42Q12277 SPC42YKL042W 1092 nt4.3□□□□□ -1.72
RRP42Q12277 PHA2YNL316C 1005 nt4.3□□□□□ -1.72
RRP42Q12277 RCL1YOL010W 1104 nt4.3□□□□□ -1.72
RRP42Q12277 YPR071WYPR071W 636 nt4.3□□□□□ -1.72
RRP42Q12277 EGT2YNL327W 3126 nt4.3□□□□□ -1.72
RRP42Q12277 ZPR1YGR211W 1461 nt4.3□□□□□ -1.72
RRP42Q12277 SSH4YKL124W 1740 nt4.29□□□□□ -1.72
RRP42Q12277 MDM34YGL219C 1380 nt4.29□□□□□ -1.72
RRP42Q12277 EAR1YMR171C 1653 nt4.29□□□□□ -1.72
RRP42Q12277 RIM21YNL294C 1602 nt4.29□□□□□ -1.72
RRP42Q12277 YGR269WYGR269W 327 nt4.29□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms