Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 MCP2YLR253W 1710 nt3.86□□□□□ -1.79
HRD1Q08109 RCK2YLR248W 1833 nt3.86□□□□□ -1.79
HRD1Q08109 DRN1YGR093W 1524 nt3.85□□□□□ -1.79
HRD1Q08109 YML020WYML020W 1995 nt3.85□□□□□ -1.79
HRD1Q08109 HIS4YCL030C 2400 nt3.85□□□□□ -1.79
HRD1Q08109 GUS1YGL245W 2127 nt3.85□□□□□ -1.79
HRD1Q08109 YER158CYER158C 1722 nt3.85□□□□□ -1.79
HRD1Q08109 VPS29YHR012W 849 nt3.85□□□□□ -1.79
HRD1Q08109 YIL014C-AYIL014C-A 315 nt3.85□□□□□ -1.79
HRD1Q08109 YLR283WYLR283W 945 nt3.85□□□□□ -1.79
HRD1Q08109 YIM1YMR152W 1098 nt3.85□□□□□ -1.79
HRD1Q08109 RMI1YPL024W 726 nt3.85□□□□□ -1.79
HRD1Q08109 YPL077CYPL077C 723 nt3.85□□□□□ -1.79
HRD1Q08109 EGT2YNL327W 3126 nt3.85□□□□□ -1.79
HRD1Q08109 IFM1YOL023W 2031 nt3.85□□□□□ -1.79
HRD1Q08109 SYP1YCR030C 2613 nt3.85□□□□□ -1.79
HRD1Q08109 ATG18YFR021W 1503 nt3.85□□□□□ -1.79
HRD1Q08109 NUP2YLR335W 2163 nt3.85□□□□□ -1.79
HRD1Q08109 RTC5YOR118W 1704 nt3.84□□□□□ -1.79
HRD1Q08109 LAS21YJL062W 2493 nt3.84□□□□□ -1.79
HRD1Q08109 SKM1YOL113W 1968 nt3.84□□□□□ -1.79
HRD1Q08109 YCR006CYCR006C 474 nt3.84□□□□□ -1.79
HRD1Q08109 CPR4YCR069W 957 nt3.84□□□□□ -1.79
HRD1Q08109 SRB5YGR104C 924 nt3.84□□□□□ -1.79
HRD1Q08109 SAP4YGL229C 2457 nt3.84□□□□□ -1.8
HRD1Q08109 CBP1YJL209W 1965 nt3.83□□□□□ -1.8
HRD1Q08109 HMG1YML075C 3165 nt3.83□□□□□ -1.8
HRD1Q08109 SMF1YOL122C 1728 nt3.82□□□□□ -1.8
HRD1Q08109 EAR1YMR171C 1653 nt3.82□□□□□ -1.8
HRD1Q08109 NAT2YGR147C 867 nt3.82□□□□□ -1.8
HRD1Q08109 NMD4YLR363C 657 nt3.82□□□□□ -1.8
HRD1Q08109 YMR082CYMR082C 357 nt3.82□□□□□ -1.8
HRD1Q08109 YPL191CYPL191C 1083 nt3.82□□□□□ -1.8
HRD1Q08109 MTR10YOR160W 2919 nt3.82□□□□□ -1.8
HRD1Q08109 THI7YLR237W 1797 nt3.81□□□□□ -1.8
HRD1Q08109 SRV2YNL138W 1581 nt3.81□□□□□ -1.8
HRD1Q08109 NUP133YKR082W 3474 nt3.81□□□□□ -1.8
HRD1Q08109 RNA15YGL044C 891 nt3.81□□□□□ -1.8
HRD1Q08109 YAL047W-AYAL047W-A 330 nt3.81□□□□□ -1.8
HRD1Q08109 ORM2YLR350W 651 nt3.81□□□□□ -1.8
HRD1Q08109 YNL134CYNL134C 1131 nt3.81□□□□□ -1.8
HRD1Q08109 AIF1YNR074C 1137 nt3.81□□□□□ -1.8
HRD1Q08109 ARC40YBR234C 1155 nt3.81□□□□□ -1.8
HRD1Q08109 IMA3YIL172C 1770 nt3.81□□□□□ -1.8
HRD1Q08109 IMA4YJL221C 1770 nt3.81□□□□□ -1.8
HRD1Q08109 TCO89YPL180W 2400 nt3.81□□□□□ -1.8
HRD1Q08109 OLE1YGL055W 1533 nt3.8□□□□□ -1.8
HRD1Q08109 OAF1YAL051W 3144 nt3.8□□□□□ -1.8
HRD1Q08109 MEF2YJL102W 2460 nt3.8□□□□□ -1.8
HRD1Q08109 SWC3YAL011W 1878 nt3.8□□□□□ -1.8
HRD1Q08109 snR7-SsnR7-S 179 nt3.8□□□□□ -1.8
HRD1Q08109 ARG82YDR173C 1068 nt3.8□□□□□ -1.8
HRD1Q08109 SNA2YDR525W-A 240 nt3.8□□□□□ -1.8
HRD1Q08109 TYW3YGL050W 822 nt3.8□□□□□ -1.8
HRD1Q08109 OCA1YNL099C 717 nt3.8□□□□□ -1.8
HRD1Q08109 HSP26YBR072W 645 nt3.8□□□□□ -1.8
HRD1Q08109 AIM10YER087W 1731 nt3.8□□□□□ -1.8
HRD1Q08109 CBF5YLR175W 1452 nt3.79□□□□□ -1.8
HRD1Q08109 UPC2YDR213W 2742 nt3.79□□□□□ -1.8
HRD1Q08109 MSC2YDR205W 2175 nt3.79□□□□□ -1.8
HRD1Q08109 CNM67YNL225C 1746 nt3.79□□□□□ -1.8
HRD1Q08109 SWI3YJL176C 2478 nt3.79□□□□□ -1.8
HRD1Q08109 IKS1YJL057C 2004 nt3.79□□□□□ -1.8
HRD1Q08109 YGR066CYGR066C 879 nt3.79□□□□□ -1.8
HRD1Q08109 RFU1YLR073C 603 nt3.79□□□□□ -1.8
HRD1Q08109 MRPL39YML009C 213 nt3.79□□□□□ -1.8
HRD1Q08109 ARG8YOL140W 1272 nt3.79□□□□□ -1.8
HRD1Q08109 SLD7YOR060C 774 nt3.79□□□□□ -1.8
HRD1Q08109 KEX1YGL203C 2190 nt3.79□□□□□ -1.8
HRD1Q08109 HCM1YCR065W 1695 nt3.78□□□□□ -1.8
HRD1Q08109 GPI18YBR004C 1302 nt3.78□□□□□ -1.8
HRD1Q08109 ISR1YPR106W 1332 nt3.78□□□□□ -1.8
HRD1Q08109 PEX7YDR142C 1128 nt3.78□□□□□ -1.8
HRD1Q08109 YDR274CYDR274C 372 nt3.78□□□□□ -1.8
HRD1Q08109 DCD1YHR144C 939 nt3.78□□□□□ -1.8
HRD1Q08109 YIL028WYIL028W 399 nt3.78□□□□□ -1.8
HRD1Q08109 RAD27YKL113C 1149 nt3.78□□□□□ -1.8
HRD1Q08109 ISA1YLL027W 753 nt3.78□□□□□ -1.8
HRD1Q08109 SCP1YOR367W 603 nt3.78□□□□□ -1.8
HRD1Q08109 SSO1YPL232W 873 nt3.78□□□□□ -1.8
HRD1Q08109 YPR174CYPR174C 666 nt3.78□□□□□ -1.8
HRD1Q08109 TAF7YMR227C 1773 nt3.78□□□□□ -1.8
HRD1Q08109 GIP4YAL031C 2283 nt3.78□□□□□ -1.8
HRD1Q08109 YKL169CYKL169C 384 nt3.77□□□□□ -1.81
HRD1Q08109 TVP38YKR088C 1014 nt3.77□□□□□ -1.81
HRD1Q08109 UBI4YLL039C 1146 nt3.77□□□□□ -1.81
HRD1Q08109 NOP13YNL175C 1212 nt3.77□□□□□ -1.81
HRD1Q08109 YTH1YPR107C 627 nt3.77□□□□□ -1.81
HRD1Q08109 MCM2YBL023C 2607 nt3.77□□□□□ -1.81
HRD1Q08109 TOG1YER184C 2385 nt3.77□□□□□ -1.81
HRD1Q08109 LCB2YDR062W 1686 nt3.77□□□□□ -1.81
HRD1Q08109 TAF12YDR145W 1620 nt3.77□□□□□ -1.81
HRD1Q08109 NOP8YOL144W 1455 nt3.76□□□□□ -1.81
HRD1Q08109 YDL027CYDL027C 1263 nt3.76□□□□□ -1.81
HRD1Q08109 RPS11AYDR025W 471 nt3.76□□□□□ -1.81
HRD1Q08109 COG1YGL223C 1254 nt3.76□□□□□ -1.81
HRD1Q08109 COA3YJL062W-A 258 nt3.76□□□□□ -1.81
HRD1Q08109 KTR2YKR061W 1278 nt3.76□□□□□ -1.81
HRD1Q08109 MRPL4YLR439W 960 nt3.76□□□□□ -1.81
HRD1Q08109 YNL194CYNL194C 906 nt3.76□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms