Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 CBP4YGR174C 513 nt3.16□□□□□ -1.9
LSM6Q06406 YAL044W-AYAL044W-A 333 nt3.16□□□□□ -1.9
LSM6Q06406 MRPL22YNL177C 930 nt3.16□□□□□ -1.9
LSM6Q06406 YPR169W-AYPR169W-A 219 nt3.16□□□□□ -1.9
LSM6Q06406 YPR170W-BYPR170W-B 258 nt3.16□□□□□ -1.9
LSM6Q06406 THI21YPL258C 1656 nt3.16□□□□□ -1.9
LSM6Q06406 MTR10YOR160W 2919 nt3.16□□□□□ -1.9
LSM6Q06406 CHD1YER164W 4407 nt3.15□□□□□ -1.9
LSM6Q06406 MNL1YHR204W 2391 nt3.15□□□□□ -1.9
LSM6Q06406 RPS13YDR064W 456 nt3.15□□□□□ -1.91
LSM6Q06406 NUP42YDR192C 1293 nt3.15□□□□□ -1.91
LSM6Q06406 GAT4YIR013C 366 nt3.15□□□□□ -1.91
LSM6Q06406 SHE1YBL031W 1017 nt3.15□□□□□ -1.91
LSM6Q06406 YPL199CYPL199C 723 nt3.15□□□□□ -1.91
LSM6Q06406 NCE102YPR149W 522 nt3.15□□□□□ -1.91
LSM6Q06406 RKM2YDR198C 1440 nt3.15□□□□□ -1.91
LSM6Q06406 HUL4YJR036C 2679 nt3.14□□□□□ -1.91
LSM6Q06406 YDR401WYDR401W 564 nt3.14□□□□□ -1.91
LSM6Q06406 YER133W-AYER133W-A 342 nt3.14□□□□□ -1.91
LSM6Q06406 PUS6YGR169C 1215 nt3.14□□□□□ -1.91
LSM6Q06406 RTA1YGR213C 954 nt3.14□□□□□ -1.91
LSM6Q06406 BGL2YGR282C 942 nt3.14□□□□□ -1.91
LSM6Q06406 DCN1YLR128W 810 nt3.14□□□□□ -1.91
LSM6Q06406 YML020WYML020W 1995 nt3.14□□□□□ -1.91
LSM6Q06406 NUP133YKR082W 3474 nt3.14□□□□□ -1.91
LSM6Q06406 URA7YBL039C 1740 nt3.13□□□□□ -1.91
LSM6Q06406 GLE2YER107C 1098 nt3.13□□□□□ -1.91
LSM6Q06406 YGR066CYGR066C 879 nt3.13□□□□□ -1.91
LSM6Q06406 COA3YJL062W-A 258 nt3.13□□□□□ -1.91
LSM6Q06406 SIW14YNL032W 846 nt3.13□□□□□ -1.91
LSM6Q06406 UTP23YOR004W 765 nt3.13□□□□□ -1.91
LSM6Q06406 FSH3YOR280C 801 nt3.13□□□□□ -1.91
LSM6Q06406 SRB5YGR104C 924 nt3.12□□□□□ -1.91
LSM6Q06406 HIS6YIL020C 786 nt3.12□□□□□ -1.91
LSM6Q06406 GVP36YIL041W 981 nt3.12□□□□□ -1.91
LSM6Q06406 YJR112W-AYJR112W-A 330 nt3.12□□□□□ -1.91
LSM6Q06406 MRP17YKL003C 396 nt3.12□□□□□ -1.91
LSM6Q06406 PEX22YAL055W 543 nt3.12□□□□□ -1.91
LSM6Q06406 YLR156WYLR156W 345 nt3.12□□□□□ -1.91
LSM6Q06406 YLR157W-DYLR157W-D 213 nt3.12□□□□□ -1.91
LSM6Q06406 YLR159WYLR159W 345 nt3.12□□□□□ -1.91
LSM6Q06406 YLR161WYLR161W 345 nt3.12□□□□□ -1.91
LSM6Q06406 YBL059WYBL059W 582 nt3.12□□□□□ -1.91
LSM6Q06406 REX4YOL080C 870 nt3.12□□□□□ -1.91
LSM6Q06406 YPL136WYPL136W 369 nt3.12□□□□□ -1.91
LSM6Q06406 TIF5YPR041W 1218 nt3.12□□□□□ -1.91
LSM6Q06406 VPS45YGL095C 1734 nt3.12□□□□□ -1.91
LSM6Q06406 COT1YOR316C 1320 nt3.12□□□□□ -1.91
LSM6Q06406 BUD7YOR299W 2241 nt3.12□□□□□ -1.91
LSM6Q06406 YTM1YOR272W 1383 nt3.12□□□□□ -1.91
LSM6Q06406 TRE1YPL176C 2352 nt3.11□□□□□ -1.91
LSM6Q06406 MKS1YNL076W 1755 nt3.11□□□□□ -1.91
LSM6Q06406 YDL119CYDL119C 924 nt3.11□□□□□ -1.91
LSM6Q06406 RPL24AYGL031C 468 nt3.11□□□□□ -1.91
LSM6Q06406 ECM1YAL059W 639 nt3.11□□□□□ -1.91
LSM6Q06406 YGP1YNL160W 1065 nt3.11□□□□□ -1.91
LSM6Q06406 URE2YNL229C 1065 nt3.11□□□□□ -1.91
LSM6Q06406 RCL1YOL010W 1104 nt3.11□□□□□ -1.91
LSM6Q06406 HMG1YML075C 3165 nt3.1□□□□□ -1.91
LSM6Q06406 BSC5YNR069C 1470 nt3.1□□□□□ -1.91
LSM6Q06406 MLH2YLR035C 2088 nt3.1□□□□□ -1.91
LSM6Q06406 IOC2YLR095C 2439 nt3.1□□□□□ -1.91
LSM6Q06406 YMR221CYMR221C 1515 nt3.1□□□□□ -1.91
LSM6Q06406 ABP140YOR239W 1887 nt3.1□□□□□ -1.91
LSM6Q06406 GCV1YDR019C 1203 nt3.1□□□□□ -1.91
LSM6Q06406 ASP1YDR321W 1146 nt3.1□□□□□ -1.91
LSM6Q06406 YIL171WYIL171W 330 nt3.1□□□□□ -1.91
LSM6Q06406 IES3YLR052W 753 nt3.1□□□□□ -1.91
LSM6Q06406 IDP2YLR174W 1239 nt3.1□□□□□ -1.91
LSM6Q06406 NKP2YLR315W 462 nt3.1□□□□□ -1.91
LSM6Q06406 YMR130WYMR130W 909 nt3.1□□□□□ -1.91
LSM6Q06406 HCM1YCR065W 1695 nt3.1□□□□□ -1.91
LSM6Q06406 FMP25YLR077W 1752 nt3.1□□□□□ -1.91
LSM6Q06406 PTR2YKR093W 1806 nt3.09□□□□□ -1.91
LSM6Q06406 MSS116YDR194C 1995 nt3.09□□□□□ -1.91
LSM6Q06406 SIS2YKR072C 1689 nt3.09□□□□□ -1.91
LSM6Q06406 MNN10YDR245W 1182 nt3.09□□□□□ -1.91
LSM6Q06406 LOH1YJL038C 660 nt3.09□□□□□ -1.91
LSM6Q06406 SRP40YKR092C 1221 nt3.09□□□□□ -1.91
LSM6Q06406 TAF11YML015C 1041 nt3.09□□□□□ -1.91
LSM6Q06406 UIP4YPL186C 915 nt3.09□□□□□ -1.91
LSM6Q06406 LYS21YDL131W 1323 nt3.09□□□□□ -1.91
LSM6Q06406 RSC3YDR303C 2658 nt3.09□□□□□ -1.91
LSM6Q06406 RPB2YOR151C 3675 nt3.09□□□□□ -1.92
LSM6Q06406 SRP72YPL210C 1923 nt3.09□□□□□ -1.92
LSM6Q06406 ECM32YER176W 3366 nt3.09□□□□□ -1.92
LSM6Q06406 HIS4YCL030C 2400 nt3.09□□□□□ -1.92
LSM6Q06406 BBC1YJL020C 3474 nt3.08□□□□□ -1.92
LSM6Q06406 AAD10YJR155W 867 nt3.08□□□□□ -1.92
LSM6Q06406 RPL14AYKL006W 417 nt3.08□□□□□ -1.92
LSM6Q06406 RAD17YOR368W 1206 nt3.08□□□□□ -1.92
LSM6Q06406 OM14YBR230C 405 nt3.08□□□□□ -1.92
LSM6Q06406 FYV5YCL058C 459 nt3.08□□□□□ -1.92
LSM6Q06406 CBF5YLR175W 1452 nt3.08□□□□□ -1.92
LSM6Q06406 PTA1YAL043C 2358 nt3.08□□□□□ -1.92
LSM6Q06406 PMT5YDL093W 2232 nt3.07□□□□□ -1.92
LSM6Q06406 SLO1YER180C-A 258 nt3.07□□□□□ -1.92
LSM6Q06406 ARC1YGL105W 1131 nt3.07□□□□□ -1.92
LSM6Q06406 tQ(UUG)CtQ(UUG)C 72 nt3.07□□□□□ -1.92
LSM6Q06406 tQ(UUG)D1tQ(UUG)D1 72 nt3.07□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 25.4 ms