Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 SSP120YLR250W 705 nt5.68□□□□□ -1.5
NPL3Q01560 MDJ2YNL328C 441 nt5.68□□□□□ -1.5
NPL3Q01560 ROX3YBL093C 663 nt5.68□□□□□ -1.5 RIP-Chip
NPL3Q01560 AIM39YOL053W 1188 nt5.68□□□□□ -1.5
NPL3Q01560 YBR196C-BYBR196C-B 105 nt5.68□□□□□ -1.5
NPL3Q01560 MPH2YDL247W 1830 nt5.68□□□□□ -1.5
NPL3Q01560 YFL042CYFL042C 2025 nt5.68□□□□□ -1.5
NPL3Q01560 YDR109CYDR109C 2148 nt5.68□□□□□ -1.5
NPL3Q01560 TKL1YPR074C 2043 nt5.67□□□□□ -1.5
NPL3Q01560 TRM13YOL125W 1431 nt5.67□□□□□ -1.5
NPL3Q01560 VMA13YPR036W 1437 nt5.67□□□□□ -1.5
NPL3Q01560 HMRA1YCR097W 381 nt5.67□□□□□ -1.5 RIP-Chip
NPL3Q01560 RPS9AYPL081W 594 nt5.67□□□□□ -1.5
NPL3Q01560 CTS2YDR371W 1536 nt5.67□□□□□ -1.5
NPL3Q01560 DRN1YGR093W 1524 nt5.67□□□□□ -1.5 RIP-Chip
NPL3Q01560 YOL036WYOL036W 2286 nt5.67□□□□□ -1.5 RIP-Chip
NPL3Q01560 GEX1YCL073C 1848 nt5.67□□□□□ -1.5
NPL3Q01560 DPH2YKL191W 1605 nt5.66□□□□□ -1.5
NPL3Q01560 MEC3YLR288C 1425 nt5.66□□□□□ -1.5
NPL3Q01560 DBP5YOR046C 1449 nt5.66□□□□□ -1.5
NPL3Q01560 TRM1YDR120C 1713 nt5.66□□□□□ -1.5
NPL3Q01560 RGP1YDR137W 1992 nt5.66□□□□□ -1.5
NPL3Q01560 YCR015CYCR015C 954 nt5.66□□□□□ -1.5
NPL3Q01560 MDH3YDL078C 1032 nt5.66□□□□□ -1.5
NPL3Q01560 PEX14YGL153W 1026 nt5.66□□□□□ -1.5 RIP-Chip
NPL3Q01560 YGR270C-AYGR270C-A 219 nt5.66□□□□□ -1.5
NPL3Q01560 RRP4YHR069C 1080 nt5.66□□□□□ -1.5
NPL3Q01560 GAT4YIR013C 366 nt5.66□□□□□ -1.5
NPL3Q01560 IPP1YBR011C 864 nt5.66□□□□□ -1.5
NPL3Q01560 YBR013CYBR013C 390 nt5.66□□□□□ -1.5
NPL3Q01560 PNT1YOR266W 1272 nt5.66□□□□□ -1.5
NPL3Q01560 CLP1YOR250C 1338 nt5.66□□□□□ -1.5
NPL3Q01560 PKC1YBL105C 3456 nt5.66□□□□□ -1.5
NPL3Q01560 DIA3YDL024C 1407 nt5.65□□□□□ -1.5
NPL3Q01560 ARB1YER036C 1833 nt5.65□□□□□ -1.5
NPL3Q01560 RPS2YGL123W 765 nt5.65□□□□□ -1.5
NPL3Q01560 CUP1-1YHR053C 186 nt5.65□□□□□ -1.5 RIP-Chip
NPL3Q01560 CUP1-2YHR055C 186 nt5.65□□□□□ -1.5 RIP-Chip
NPL3Q01560 MTR2YKL186C 555 nt5.65□□□□□ -1.5 RIP-Chip
NPL3Q01560 SMD3YLR147C 306 nt5.65□□□□□ -1.5
NPL3Q01560 GPN3YLR243W 819 nt5.65□□□□□ -1.5
NPL3Q01560 GAB1YLR459W 1185 nt5.65□□□□□ -1.5 RIP-Chip
NPL3Q01560 SNO4YMR322C 714 nt5.65□□□□□ -1.5
NPL3Q01560 YNL171CYNL171C 369 nt5.65□□□□□ -1.5
NPL3Q01560 RUF5-1RUF5-1 710 nt5.65□□□□□ -1.5
NPL3Q01560 RUF5-2RUF5-2 710 nt5.65□□□□□ -1.5
NPL3Q01560 HSP33YOR391C 714 nt5.65□□□□□ -1.5
NPL3Q01560 HSP32YPL280W 714 nt5.65□□□□□ -1.5
NPL3Q01560 TUL1YKL034W 2277 nt5.65□□□□□ -1.51
NPL3Q01560 HSP78YDR258C 2436 nt5.65□□□□□ -1.51
NPL3Q01560 RHB1YCR027C 630 nt5.64□□□□□ -1.51
NPL3Q01560 CBS2YDR197W 1170 nt5.64□□□□□ -1.51
NPL3Q01560 YER148W-AYER148W-A 579 nt5.64□□□□□ -1.51
NPL3Q01560 YGR149WYGR149W 1299 nt5.64□□□□□ -1.51
NPL3Q01560 YHR028W-AYHR028W-A 321 nt5.64□□□□□ -1.51
NPL3Q01560 YLR296WYLR296W 327 nt5.64□□□□□ -1.51
NPL3Q01560 CUS2YNL286W 858 nt5.64□□□□□ -1.51
NPL3Q01560 AIF1YNR074C 1137 nt5.64□□□□□ -1.51
NPL3Q01560 CPA1YOR303W 1236 nt5.64□□□□□ -1.51 RIP-Chip
NPL3Q01560 SFG1YOR315W 1041 nt5.64□□□□□ -1.51 RIP-Chip
NPL3Q01560 VMA4YOR332W 702 nt5.64□□□□□ -1.51 RIP-Chip
NPL3Q01560 MRP2YPR166C 348 nt5.64□□□□□ -1.51
NPL3Q01560 YBR124WYBR124W 360 nt5.64□□□□□ -1.51
NPL3Q01560 YBR219CYBR219C 384 nt5.64□□□□□ -1.51
NPL3Q01560 FPK1YNR047W 2682 nt5.64□□□□□ -1.51
NPL3Q01560 RNR3YIL066C 2610 nt5.63□□□□□ -1.51
NPL3Q01560 GGA1YDR358W 1674 nt5.63□□□□□ -1.51
NPL3Q01560 DBF2YGR092W 1719 nt5.63□□□□□ -1.51
NPL3Q01560 KEX2YNL238W 2445 nt5.63□□□□□ -1.51
NPL3Q01560 YTA12YMR089C 2478 nt5.63□□□□□ -1.51
NPL3Q01560 YDR029WYDR029W 315 nt5.63□□□□□ -1.51
NPL3Q01560 CPR1YDR155C 489 nt5.63□□□□□ -1.51 RIP-Chip
NPL3Q01560 SPT3YDR392W 1014 nt5.63□□□□□ -1.51
NPL3Q01560 NQM1YGR043C 1002 nt5.63□□□□□ -1.51
NPL3Q01560 PAN6YIL145C 930 nt5.63□□□□□ -1.51
NPL3Q01560 YJR071WYJR071W 369 nt5.63□□□□□ -1.51
NPL3Q01560 YLR462WYLR462W 609 nt5.63□□□□□ -1.51
NPL3Q01560 CSM3YMR048W 954 nt5.63□□□□□ -1.51
NPL3Q01560 MVD1YNR043W 1191 nt5.63□□□□□ -1.51
NPL3Q01560 YPR027CYPR027C 834 nt5.63□□□□□ -1.51
NPL3Q01560 YPR202WYPR202W 717 nt5.63□□□□□ -1.51
NPL3Q01560 SUB2YDL084W 1341 nt5.63□□□□□ -1.51
NPL3Q01560 ERG4YGL012W 1422 nt5.63□□□□□ -1.51
NPL3Q01560 YCL065WYCL065W 369 nt5.62□□□□□ -1.51
NPL3Q01560 URA3YEL021W 804 nt5.62□□□□□ -1.51
NPL3Q01560 PEX21YGR239C 867 nt5.62□□□□□ -1.51
NPL3Q01560 APS3YJL024C 585 nt5.62□□□□□ -1.51
NPL3Q01560 YLR163W-AYLR163W-A 114 nt5.62□□□□□ -1.51
NPL3Q01560 URA5YML106W 681 nt5.62□□□□□ -1.51
NPL3Q01560 EAF7YNL136W 1278 nt5.62□□□□□ -1.51
NPL3Q01560 SLZ1YNL196C 897 nt5.62□□□□□ -1.51
NPL3Q01560 PDX3YBR035C 687 nt5.62□□□□□ -1.51
NPL3Q01560 ARL3YPL051W 597 nt5.62□□□□□ -1.51
NPL3Q01560 NCE102YPR149W 522 nt5.62□□□□□ -1.51 RIP-Chip
NPL3Q01560 SAD1YFR005C 1347 nt5.62□□□□□ -1.51
NPL3Q01560 CEG1YGL130W 1380 nt5.62□□□□□ -1.51
NPL3Q01560 ALG1YBR110W 1350 nt5.62□□□□□ -1.51
NPL3Q01560 GAS3YMR215W 1575 nt5.62□□□□□ -1.51
NPL3Q01560 TNA1YGR260W 1605 nt5.62□□□□□ -1.51
NPL3Q01560 MOT2YER068W 1764 nt5.62□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms