Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HSPG2P98160 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.29□□□□□ -0.12
HSPG2P98160 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.29□□□□□ -0.12
HSPG2P98160 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.29□□□□□ -0.12
HSPG2P98160 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HSPG2P98160 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HSPG2P98160 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.29□□□□□ -0.12
HSPG2P98160 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HSPG2P98160 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.29□□□□□ -0.12
HSPG2P98160 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.29□□□□□ -0.12
HSPG2P98160 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.28□□□□□ -0.12
HSPG2P98160 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.28□□□□□ -0.12
HSPG2P98160 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.28□□□□□ -0.12
HSPG2P98160 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.28□□□□□ -0.12
HSPG2P98160 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 AC004854.2-201ENST00000608450 1441 ntBASIC14.28□□□□□ -0.12
HSPG2P98160 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.28□□□□□ -0.12
HSPG2P98160 TPRG1LP1-201ENST00000598702 760 ntBASIC14.28□□□□□ -0.12
HSPG2P98160 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HSPG2P98160 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HSPG2P98160 AC091060.1-201ENST00000623524 1766 ntBASIC14.27□□□□□ -0.12
HSPG2P98160 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.27□□□□□ -0.12
HSPG2P98160 AC069152.1-201ENST00000438030 544 ntBASIC14.27□□□□□ -0.12
HSPG2P98160 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.27□□□□□ -0.12
HSPG2P98160 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.27□□□□□ -0.12
HSPG2P98160 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.12
HSPG2P98160 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HSPG2P98160 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC14.27□□□□□ -0.13
HSPG2P98160 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HSPG2P98160 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.27□□□□□ -0.13
HSPG2P98160 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HSPG2P98160 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HSPG2P98160 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HSPG2P98160 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HSPG2P98160 AC098590.1-201ENST00000468126 897 ntBASIC14.27□□□□□ -0.13
HSPG2P98160 SLC7A5P2-201ENST00000553010 536 ntBASIC14.27□□□□□ -0.13
HSPG2P98160 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.27□□□□□ -0.13
HSPG2P98160 AP004607.4-201ENST00000530158 1459 ntBASIC14.26□□□□□ -0.13
HSPG2P98160 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.26□□□□□ -0.13
HSPG2P98160 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HSPG2P98160 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HSPG2P98160 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.26□□□□□ -0.13
HSPG2P98160 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.26□□□□□ -0.13
HSPG2P98160 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.25□□□□□ -0.13
HSPG2P98160 AL596275.1-201ENST00000423464 877 ntBASIC14.25□□□□□ -0.13
HSPG2P98160 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.25□□□□□ -0.13
HSPG2P98160 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.25□□□□□ -0.13
HSPG2P98160 AC011767.1-201ENST00000617410 1153 ntBASIC14.25□□□□□ -0.13
HSPG2P98160 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HSPG2P98160 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.25□□□□□ -0.13
HSPG2P98160 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.25□□□□□ -0.13
HSPG2P98160 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC14.24□□□□□ -0.13
HSPG2P98160 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC14.24□□□□□ -0.13
HSPG2P98160 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC14.24□□□□□ -0.13
HSPG2P98160 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HSPG2P98160 AC098934.4-201ENST00000564127 592 ntBASIC14.24□□□□□ -0.13
HSPG2P98160 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.24□□□□□ -0.13
HSPG2P98160 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC14.24□□□□□ -0.13
HSPG2P98160 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.24□□□□□ -0.13
HSPG2P98160 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.24□□□□□ -0.13
HSPG2P98160 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HSPG2P98160 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms