Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HSPG2P98160 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.29□□□□□ -0.12
HSPG2P98160 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.29□□□□□ -0.12
HSPG2P98160 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.29□□□□□ -0.12
HSPG2P98160 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HSPG2P98160 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HSPG2P98160 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.29□□□□□ -0.12
HSPG2P98160 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HSPG2P98160 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.29□□□□□ -0.12
HSPG2P98160 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.29□□□□□ -0.12
HSPG2P98160 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.28□□□□□ -0.12
HSPG2P98160 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.28□□□□□ -0.12
HSPG2P98160 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.28□□□□□ -0.12
HSPG2P98160 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.28□□□□□ -0.12
HSPG2P98160 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 AC004854.2-201ENST00000608450 1441 ntBASIC14.28□□□□□ -0.12
HSPG2P98160 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.28□□□□□ -0.12
HSPG2P98160 TPRG1LP1-201ENST00000598702 760 ntBASIC14.28□□□□□ -0.12
HSPG2P98160 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HSPG2P98160 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HSPG2P98160 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HSPG2P98160 AC091060.1-201ENST00000623524 1766 ntBASIC14.27□□□□□ -0.12
HSPG2P98160 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.27□□□□□ -0.12
HSPG2P98160 AC069152.1-201ENST00000438030 544 ntBASIC14.27□□□□□ -0.12
HSPG2P98160 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.27□□□□□ -0.12
HSPG2P98160 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.27□□□□□ -0.12
HSPG2P98160 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.12
HSPG2P98160 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HSPG2P98160 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC14.27□□□□□ -0.13
HSPG2P98160 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HSPG2P98160 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.27□□□□□ -0.13
HSPG2P98160 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HSPG2P98160 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HSPG2P98160 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HSPG2P98160 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HSPG2P98160 AC098590.1-201ENST00000468126 897 ntBASIC14.27□□□□□ -0.13
HSPG2P98160 SLC7A5P2-201ENST00000553010 536 ntBASIC14.27□□□□□ -0.13
HSPG2P98160 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.27□□□□□ -0.13
HSPG2P98160 AP004607.4-201ENST00000530158 1459 ntBASIC14.26□□□□□ -0.13
HSPG2P98160 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.26□□□□□ -0.13
HSPG2P98160 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HSPG2P98160 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HSPG2P98160 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.26□□□□□ -0.13
HSPG2P98160 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.26□□□□□ -0.13
HSPG2P98160 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HSPG2P98160 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.25□□□□□ -0.13
HSPG2P98160 AL596275.1-201ENST00000423464 877 ntBASIC14.25□□□□□ -0.13
HSPG2P98160 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.25□□□□□ -0.13
HSPG2P98160 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.25□□□□□ -0.13
HSPG2P98160 AC011767.1-201ENST00000617410 1153 ntBASIC14.25□□□□□ -0.13
HSPG2P98160 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HSPG2P98160 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HSPG2P98160 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
HSPG2P98160 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.25□□□□□ -0.13
HSPG2P98160 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.25□□□□□ -0.13
HSPG2P98160 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC14.24□□□□□ -0.13
HSPG2P98160 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC14.24□□□□□ -0.13
HSPG2P98160 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC14.24□□□□□ -0.13
HSPG2P98160 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HSPG2P98160 AC098934.4-201ENST00000564127 592 ntBASIC14.24□□□□□ -0.13
HSPG2P98160 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.24□□□□□ -0.13
HSPG2P98160 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC14.24□□□□□ -0.13
HSPG2P98160 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.24□□□□□ -0.13
HSPG2P98160 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.24□□□□□ -0.13
HSPG2P98160 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
HSPG2P98160 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HSPG2P98160 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms