Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX6-1P78426 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.77■□□□□ 0.76
NKX6-1P78426 AC105265.2-201ENST00000467189 838 ntBASIC19.77■□□□□ 0.76
NKX6-1P78426 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX6-1P78426 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX6-1P78426 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX6-1P78426 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX6-1P78426 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX6-1P78426 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX6-1P78426 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NKX6-1P78426 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NKX6-1P78426 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-1P78426 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NKX6-1P78426 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NKX6-1P78426 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-1P78426 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-1P78426 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
NKX6-1P78426 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-1P78426 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-1P78426 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-1P78426 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-1P78426 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-1P78426 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NKX6-1P78426 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-1P78426 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-1P78426 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NKX6-1P78426 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.76■□□□□ 0.75
NKX6-1P78426 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX6-1P78426 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NKX6-1P78426 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX6-1P78426 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX6-1P78426 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX6-1P78426 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX6-1P78426 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX6-1P78426 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX6-1P78426 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-1P78426 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-1P78426 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-1P78426 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-1P78426 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NKX6-1P78426 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-1P78426 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.74■□□□□ 0.75
NKX6-1P78426 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
NKX6-1P78426 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.74■□□□□ 0.75
NKX6-1P78426 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NKX6-1P78426 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-1P78426 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-1P78426 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.74■□□□□ 0.75
NKX6-1P78426 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX6-1P78426 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-1P78426 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-1P78426 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-1P78426 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.73■□□□□ 0.75
NKX6-1P78426 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-1P78426 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-1P78426 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-1P78426 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NKX6-1P78426 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.73■□□□□ 0.75
NKX6-1P78426 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.73■□□□□ 0.75
NKX6-1P78426 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NKX6-1P78426 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-1P78426 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NKX6-1P78426 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NKX6-1P78426 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.72■□□□□ 0.75
NKX6-1P78426 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.72■□□□□ 0.75
NKX6-1P78426 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX6-1P78426 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX6-1P78426 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX6-1P78426 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NKX6-1P78426 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX6-1P78426 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX6-1P78426 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
NKX6-1P78426 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX6-1P78426 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX6-1P78426 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX6-1P78426 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX6-1P78426 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.72■□□□□ 0.75
NKX6-1P78426 AL136967.2-201ENST00000623968 743 ntBASIC19.72■□□□□ 0.75
NKX6-1P78426 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.71■□□□□ 0.75
NKX6-1P78426 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-1P78426 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-1P78426 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-1P78426 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-1P78426 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX6-1P78426 AF213884.3-201ENST00000563833 479 ntBASIC19.71■□□□□ 0.75
NKX6-1P78426 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NKX6-1P78426 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX6-1P78426 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-1P78426 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NKX6-1P78426 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-1P78426 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-1P78426 AC005703.6-201ENST00000623265 1329 ntBASIC19.71■□□□□ 0.75
NKX6-1P78426 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-1P78426 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX6-1P78426 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX6-1P78426 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-1P78426 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-1P78426 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-1P78426 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX6-1P78426 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms